| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3212 |
|---|
| Symbol | |
|---|
| ID | 4174989 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 3855702 |
|---|
| End bp | 3856979 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 638056243 |
|---|
| Product | coagulation factor 5/8 type-like |
|---|
| Protein accession | YP_662772 |
|---|
| Protein GI | 109899517 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTCTT TTAGAAAAAA ATCTTCTTCA ATAGAAGACG AATCGGATAC TTTAAAATCC
ATTGAAAGGT ATCTAAAGTC TCACCCTTTG AGAGAATTCA AAGGGGTGAA AAGTGATGAT
CCTCTTATCA TCGAAACCGC AAATAAGGCG CGCTTTATTC GTCTTAGTCT GCAAGCCGAA
TCGTCCTTCC ATCTTGACGC AATAGAAATA TACAACCAAG CAGGTCGTAA TGTTGCTCCT
AATAAGCAAA CCATTATTAG TTCTACGTAC AATGATGAAC AAAAATATAA CGGGCAGGGT
GCGATAAACG GTAAAAAAAA TGGTGGGGCT GGATTCCATA CTAAAAGAGA GCACAATCCT
TGGCTGGTTA TAGATTTAGG TACTATTCGC AATCTTGCGA AGATTATCGT ATTTAATCGT
GAGGGACAGC ATTACACGCG TGCACTTAGT TTGAAAGTTG AAACGTCCCG TGATTTAAGG
CATTGGCAAC TAGTTCATGA CAACTGGGGG TTCATTAAAA GCTACAAAGA AGGAAATTTG
AGTGAATTTG AGCATGCTCT GTTGCACGCA GGTATTTTAA ATGCGGGGCC CCCTTCTGCA
TATCTCAAGA AACTAAAAAA TCAAGGCGAT GGAGATAAAG CACTTGTTTA TCATCAAATG
ATTAATGAAT TGGTTGCTAG CAAGGGCGTC GCATTTGGGC CTCACGGTTT TATGCAAACA
TTTGACCTTA AAAGCGCTGC AGAGAAAAGT AAAGTTTTCA AAGAATTATC AAAATTGTTA
TTTTGGATTA ATGAAGAGTT CAAAGTCCCA GCGTTTGTGT CTTCAGGCAC ATTACTAGGC
TTGGTAAGAG ATGGAGCATT AATTGGTCAC GACGATGATG TGGATATATG TTACATCAGT
AATGAAGAGA CTGAATCGGC AATTTTAGCC GAACGACAAC GCCTTATCGA ATTCTTAGCT
ACCAAAGGCT GTAGACTTGC GCCATCTGGG ATTGCTCATT ATTGGTGTAC AACACCAGGT
GGTTTAAGCC TAGATATATT TACTGGTTTC GTGGAAGGCG GTAACTGTAG TATGAATCCA
ATTGGGCGCA ATGAAATTCC AGTAAATGAT GTGCTGCCAC TTACTCAGCG TGACGTTGGT
GGACAAGTGC TATATTTCCC GCGAAACCCA GAGCCCCTGT TAGTATTGAA CTATGGTGAG
CAATGGCGTA GCCCTGATCC ACTATGGACT TTTAACTGGG GCAAAGCGAA GAAAGATTTT
GCATTCCTAT ATTTCTAA
|
|---|
| Protein sequence | MFSFRKKSSS IEDESDTLKS IERYLKSHPL REFKGVKSDD PLIIETANKA RFIRLSLQAE
SSFHLDAIEI YNQAGRNVAP NKQTIISSTY NDEQKYNGQG AINGKKNGGA GFHTKREHNP
WLVIDLGTIR NLAKIIVFNR EGQHYTRALS LKVETSRDLR HWQLVHDNWG FIKSYKEGNL
SEFEHALLHA GILNAGPPSA YLKKLKNQGD GDKALVYHQM INELVASKGV AFGPHGFMQT
FDLKSAAEKS KVFKELSKLL FWINEEFKVP AFVSSGTLLG LVRDGALIGH DDDVDICYIS
NEETESAILA ERQRLIEFLA TKGCRLAPSG IAHYWCTTPG GLSLDIFTGF VEGGNCSMNP
IGRNEIPVND VLPLTQRDVG GQVLYFPRNP EPLLVLNYGE QWRSPDPLWT FNWGKAKKDF
AFLYF
|
|---|
| |