Gene Patl_3213 details

Gene Information

• Locus tag: Patl_3213
• ID: 4174990
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: -
• Start bp: 3857007
• End bp: 3858962
• Gene Length: 1956 bp
• Protein Length: 651 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 638056244
• Product: hypothetical protein
• Protein accession: YP_662773
• Protein GI: 109899518

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTATCTT ATTTGAAAAA GGAAATTTCA CGTTTTCCCT TCTTTAGACA ATCAAAATGT 
AAATCTGTAA GCCCTGAAGA GCAGTATTTT AATGCTTATG CAGGGCCTGA ATTTAATGGT 
GATTCAGCTA AAGCACTATT GCTAAAAAAA CGTCTCCCAG GGTTTATTTT TGGGGCGTTT 
CGCAACGTGG CTGCTACTCA AATTCATATA GCTAAACCTA TCAAGTTTCT CAAACTGGAG 
TTAATCGCTG AATTCCCAGA AGTATTAAAC TTCAATTACA TTGCTATTTG GGCTAGAGAT 
GGCAACGGCT CTTTGTACAA AATAGAAAAG GGCTACGAAT GCTCCATGAG CACCCTAATT 
GATGCCTTAC CTGATGCTAA TGCTGTGATG TCGGGGGGAG TTGAAAATTC AGTTTCAGCC 
CATTCTCGGC GTGAAGTAAA GCCATGGTGG AGTATCGTTT TTAGTGAACC CCATTTTGTT 
GAGTTTGTGG AGTTCTATAA TCGCAAAGAC AAATGGGGGA TTCGGGCAAG AAGCATTATT 
TTTACTGGGT ATGATGAGGA CAGTAAGAGA GTTTTTAGAG GAGGGCGCAT ATTAAAGAAG 
GGAGCTGAAG ATCTATTTAG TCGTCAAGCG CTTCCGTTGA TAAAACGCTG TGATAGTTAT 
CTTAAATCTC AAGGACATAC TAAGCTCGCG ACCCAGCTCG AGTCCTCTTT CAGCAAATAT 
GTGACAAAAA GCGTTTGCGA CACAACAGAC AAATCGGCGT TGCTTGATTT AATCAGAAAA 
ATAAATTCGA CTATTGGTTA TTCCACACCA GATCTGCCTA ATGTGCAAAA AGACGCAGTC 
AAAATCGTTA TTCCACGTAC GACAAAATTC ATACGGATCG TAGGGTTTAG AAGAAAGTTG 
GAACGCCCAG TGAAATTGAA TATTTCAGTC AAGAATAAAT TGATAACCTT GGATGAAGAG 
TCGAGCACAG ATTTTTCACT TAATTATCTC CCTTTGAAAG AACATCTATG GACGTTACAA 
CACCCACATG TATTTAATTT TTCGAGTGCA GACTTAGCTA GTTGTAAAAG TGTTTCTTTG 
TGGTGTGAAG ATTTTTACAG TGGGGATGCG TTTGTTCAAA GAATAGTCCA AGCATCAGAT 
GACGGAGTTG AGTGGAAAAC TCTAGATTCA ACAATTGACA AGCTGGCGGC TCATTTAGCA 
TTGATATCCA TGCAAGAGTG GGTATTAGGC GATGATTGGG ACGAGAGGTT TGCGGATCAC 
CTTGGACAAT TTCTGGCTAC TTATAGGATG AGCCAGGCAC GAACAGTCAA ACCATTGTTT 
CGTGGTAATA AAAATTTACT AACTGCGTTC TATGATGGTG TGGAAAGTGG AGGAAACACA 
GCCACGTATT TGCCTCCTGT AATATACACT CGTCATGGCT TAACGGTGCC GTTCGAGCAT 
ATCGATTCAC AATTTCTTGC TACGAGGATG AAGCGCTTTA CCGATTTCCT CGAACTCAAA 
CTTAACCTGA AGGCGTTTCC CTGTTACGGA ACGTTACTTG GCATACATCG AGACGGTGAT 
TTCTTACCTC ATGATGATGA TATTGACTTA GCGGTGGTGG TCGATTTACC TGAAAATGTC 
ACATATCTAG ACGCGACTTT AGCTTGGGCG GACGTGCTTC GTGGCCTAGG GGTGTCTTGT 
AAGCCACCAA CACCAACCAG TTTAAATTTG CATTGCTACT TTGAAGACTT TGACATGGAT 
TTGTTTTTCA TTTATCGAAT GCCAGAGCAA CCTAAAAAAG TCTGGACTCA CATGCAAGGT 
TATCGAGTAA GGGAAGTGTC TAAGAGCCTA TTAGAGCCTT TGGGTAAGAT GGAGTTTCGT 
GGATATGAAT TTTATGCCCC AGCACAAATT GAGGCATTTT TGGAAGACCG TTACGGTAAA 
GGCTGGACAA CACCAGATCC AACATTCGAA TTATAA 

 

Protein sequence

MLSYLKKEIS RFPFFRQSKC KSVSPEEQYF NAYAGPEFNG DSAKALLLKK RLPGFIFGAF 
RNVAATQIHI AKPIKFLKLE LIAEFPEVLN FNYIAIWARD GNGSLYKIEK GYECSMSTLI 
DALPDANAVM SGGVENSVSA HSRREVKPWW SIVFSEPHFV EFVEFYNRKD KWGIRARSII 
FTGYDEDSKR VFRGGRILKK GAEDLFSRQA LPLIKRCDSY LKSQGHTKLA TQLESSFSKY 
VTKSVCDTTD KSALLDLIRK INSTIGYSTP DLPNVQKDAV KIVIPRTTKF IRIVGFRRKL 
ERPVKLNISV KNKLITLDEE SSTDFSLNYL PLKEHLWTLQ HPHVFNFSSA DLASCKSVSL 
WCEDFYSGDA FVQRIVQASD DGVEWKTLDS TIDKLAAHLA LISMQEWVLG DDWDERFADH 
LGQFLATYRM SQARTVKPLF RGNKNLLTAF YDGVESGGNT ATYLPPVIYT RHGLTVPFEH 
IDSQFLATRM KRFTDFLELK LNLKAFPCYG TLLGIHRDGD FLPHDDDIDL AVVVDLPENV 
TYLDATLAWA DVLRGLGVSC KPPTPTSLNL HCYFEDFDMD LFFIYRMPEQ PKKVWTHMQG 
YRVREVSKSL LEPLGKMEFR GYEFYAPAQI EAFLEDRYGK GWTTPDPTFE L