7 homologs were found in PanDaTox collection
for query gene Mnod_8276 on replicon NC_011892
Organism: Methylobacterium nodulans ORS 2060



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011892  Mnod_8276    100 
 
 		 459 bp  910    Methylobacterium nodulans ORS 2060  Bacteria  decreased coverage  0.00151051  n/a   
 
 
-
 
NC_010510  Mrad2831_6100  conjugal transfer coupling protein TraG  84.73 
 
 		 1992 bp  258  1.0000000000000001e-66  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011758  Mchl_5572  conjugal transfer coupling protein TraG  80.85 
 
 		 2025 bp  121  1.9999999999999998e-25  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0224305  normal  0.0294254 
 
 
-
 
NC_009717  Xaut_5000  conjugal transfer coupling protein TraG  94.29 
 
 		 1908 bp  54  0.00004  Xanthobacter autotrophicus Py2  Bacteria  normal  0.763698  normal  1 
 
 
-
 
NC_009471  Acry_3603  Type IV secretory pathway VirD4 components-like protein  90 
 
 		 390 bp  48.1  0.002  Acidiphilium cryptum JF-5  Bacteria  normal  0.720206  normal  0.831231 
 
 
-
 
NC_007643  Rru_A3763  peptidase M22, glycoprotease  96.3 
 
 		 699 bp  46.1  0.009  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_011365  Gdia_0100  cytochrome c class I  100 
 
 		 528 bp  46.1  0.009  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.102431  normal  0.12668 
 
 
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