30 homologs were found in PanDaTox collection
for query gene Mext_3615 on replicon NC_010172
Organism: Methylobacterium extorquens PA1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011757  Mchl_3907  methyl-accepting chemotaxis sensory transducer  99.18 
 
 
565 aa  488  1e-137  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_3615  hypothetical protein  100 
 
 
245 aa  484  1e-136  Methylobacterium extorquens PA1  Bacteria  normal  0.101489  normal 
 
 
-
 
NC_010172  Mext_0707  chemotaxis sensory transducer  43.03 
 
 
565 aa  170  2e-41  Methylobacterium extorquens PA1  Bacteria  normal  0.440233  normal  0.156891 
 
 
-
 
NC_011757  Mchl_0720  methyl-accepting chemotaxis sensory transducer  42.62 
 
 
565 aa  169  3e-41  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.605037  normal 
 
 
-
 
NC_010505  Mrad2831_3294  methyl-accepting chemotaxis sensory transducer  39.42 
 
 
563 aa  169  5e-41  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_0667  chemotaxis sensory transducer  36.89 
 
 
565 aa  160  2e-38  Methylobacterium extorquens PA1  Bacteria  normal  0.510632  normal  0.195802 
 
 
-
 
NC_011757  Mchl_0679  methyl-accepting chemotaxis sensory transducer  36.07 
 
 
565 aa  156  3e-37  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.0248904 
 
 
-
 
NC_010505  Mrad2831_5691  methyl-accepting chemotaxis sensory transducer  38.22 
 
 
546 aa  147  1.0000000000000001e-34  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.601083  normal  0.719302 
 
 
-
 
NC_010505  Mrad2831_0387  methyl-accepting chemotaxis sensory transducer  35.1 
 
 
565 aa  133  1.9999999999999998e-30  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_6605  methyl-accepting chemotaxis sensory transducer  33.47 
 
 
563 aa  109  5e-23  Methylobacterium sp. 4-46  Bacteria  normal  0.851708  normal  0.148496 
 
 
-
 
NC_011757  Mchl_5373  methyl-accepting chemotaxis sensory transducer  32.41 
 
 
565 aa  105  7e-22  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.620524  normal  0.472724 
 
 
-
 
NC_010172  Mext_0141  chemotaxis sensory transducer  31.56 
 
 
565 aa  102  6e-21  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_2601  methyl-accepting chemotaxis sensory transducer  28.69 
 
 
564 aa  100  3e-20  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.234791 
 
 
-
 
NC_010725  Mpop_5209  methyl-accepting chemotaxis sensory transducer  26.12 
 
 
563 aa  97.1  2e-19  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_0191  chemotaxis sensory transducer  30.33 
 
 
565 aa  89  6e-17  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.731843 
 
 
-
 
NC_010725  Mpop_0223  methyl-accepting chemotaxis sensory transducer  29.92 
 
 
565 aa  89  6e-17  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_0134  methyl-accepting chemotaxis sensory transducer  31.43 
 
 
565 aa  87  3e-16  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.150747 
 
 
-
 
NC_010172  Mext_4669  chemotaxis sensory transducer  29.64 
 
 
564 aa  83.6  0.000000000000003  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_5132  methyl-accepting chemotaxis sensory transducer  27.76 
 
 
564 aa  80.9  0.00000000000002  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.315031  normal  0.0770622 
 
 
-
 
NC_010505  Mrad2831_2241  methyl-accepting chemotaxis sensory transducer  36.36 
 
 
566 aa  62  0.000000009  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_4791  methyl-accepting chemotaxis sensory transducer  24.49 
 
 
563 aa  59.7  0.00000004  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.685315  normal 
 
 
-
 
NC_010511  M446_1024  methyl-accepting chemotaxis sensory transducer  26.67 
 
 
562 aa  53.9  0.000002  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_1266  methyl-accepting chemotaxis sensory transducer  28.93 
 
 
563 aa  54.3  0.000002  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.601412 
 
 
-
 
NC_009483  Gura_2985  methyl-accepting chemotaxis sensory transducer  21.72 
 
 
576 aa  49.7  0.00005  Geobacter uraniireducens Rf4  Bacteria  normal  0.293775  n/a   
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  40.79 
 
 
712 aa  43.9  0.002  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_010510  Mrad2831_5795  methyl-accepting chemotaxis sensory transducer  52.94 
 
 
557 aa  44.3  0.002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.922446  normal  0.440426 
 
 
-
 
NC_009485  BBta_0869  putative methyl-accepting chemotaxis receptor/sensory transducer  27.34 
 
 
662 aa  43.9  0.003  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0914748 
 
 
-
 
NC_004347  SO_0500  methyl-accepting chemotaxis protein  24.57 
 
 
543 aa  42.4  0.008  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008609  Ppro_1391  methyl-accepting chemotaxis sensory transducer  27.27 
 
 
557 aa  42  0.009  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A2764  methyl-accepting chemotaxis protein  27.96 
 
 
562 aa  42  0.01  Burkholderia pseudomallei 668  Bacteria  normal  0.627836  n/a   
 
 
-
 
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