6 homologs were found in PanDaTox collection
for query gene Mbar_AR0028 on replicon NC_007355
Organism: Methanosarcina barkeri str. Fusaro



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007355  Mbar_AR0028  tRNA-Thr  100 
 
 
74 bp  147  4.0000000000000006e-34  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal  0.490827 
 
 
-
 
NC_007355  Mbar_AR0029  tRNA-Thr  95.71 
 
 
74 bp  115  1.0000000000000001e-24  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal  0.951156 
 
 
-
 
NC_007955  Mbur_R0049  tRNA-Thr  93.75 
 
 
74 bp  95.6  1e-18  Methanococcoides burtonii DSM 6242  Archaea  hitchhiker  0.0000152851  n/a   
 
 
-
 
NC_007355  Mbar_AR0027  tRNA-OTHER  92.06 
 
 
73 bp  77.8  0.0000000000003  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_008553  Mthe_R0014  tRNA-Thr  92.16 
 
 
74 bp  69.9  0.00000000008  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_007955  Mbur_R0028  tRNA-Thr  100 
 
 
72 bp  44.1  0.004  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
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