3 homologs were found in PanDaTox collection
for query gene Lcho_3185 on replicon NC_010524
Organism: Leptothrix cholodnii SP-6



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010524  Lcho_3185  TPR repeat-containing protein  100 
 
 
469 aa  912    Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000813582 
 
 
-
 
NC_007908  Rfer_1231  hypothetical protein  39.64 
 
 
570 aa  135  9.999999999999999e-31  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_3186  hypothetical protein  40.55 
 
 
644 aa  122  9.999999999999999e-27  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00117321 
 
 
-
 
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