13 homologs were found in PanDaTox collection
for query gene Lcho_3093 on replicon NC_010524
Organism: Leptothrix cholodnii SP-6



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010524  Lcho_3093  fimbrial assembly family protein  100 
 
 		 214 aa  406  1.0000000000000001e-112  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_007298  Daro_0890  hypothetical protein  30.94 
 
 		 216 aa  72.8  0.000000000003  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  0.420603 
 
 
-
 
NC_007912  Sde_1132  methionine sulfoxide reductase B  23.86 
 
 		 202 aa  58.5  0.00000007  Saccharophagus degradans 2-40  Bacteria  normal  0.419096  normal  1 
 
 
-
 
NC_007498  Pcar_0382  MshA biogenesis protein MshI-2  32.47 
 
 		 201 aa  57  0.0000002  Pelobacter carbinolicus DSM 2380  Bacteria  normal  1  n/a   
 
 
-
 
NC_008740  Maqu_0750  fimbrial assembly family protein  31.61 
 
 		 205 aa  56.6  0.0000003  Marinobacter aquaeolei VT8  Bacteria  normal  0.151549  n/a   
 
 
-
 
NC_010506  Swoo_4420  fimbrial assembly family protein  24.74 
 
 		 200 aa  51.6  0.000008  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011901  Tgr7_3277  MshA biogenesis protein MshI-2  31.63 
 
 		 216 aa  49.3  0.00004  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  1  n/a   
 
 
-
 
NC_007908  Rfer_3335  fimbrial assembly  27 
 
 		 229 aa  47.4  0.0002  Rhodoferax ferrireducens T118  Bacteria  normal  0.345488  n/a   
 
 
-
 
NC_009831  Ssed_0541  fimbrial assembly family protein  24.32 
 
 		 203 aa  46.2  0.0004  Shewanella sediminis HAW-EB3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011138  MADE_00248  putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshI (pilus type IV)  22.58 
 
 		 208 aa  43.5  0.002  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
-
 
NC_008345  Sfri_3754  hypothetical protein  21.43 
 
 		 182 aa  42.4  0.006  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_009457  VC0395_A2817  MSHA biogenesis protein MshI  24.02 
 
 		 479 aa  41.6  0.009  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_007404  Tbd_0761  hypothetical protein  30.6 
 
 		 215 aa  41.6  0.01  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.0217944  normal  0.367584 
 
 
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