6 homologs were found in PanDaTox collection
for query gene Ksed_05300 on replicon NC_013169
Organism: Kytococcus sedentarius DSM 20547



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013169  Ksed_05300  transcriptional regulator, tetR family  100 
 
 
182 aa  359  1e-98  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_14570  transcriptional regulator, tetR family  43.65 
 
 
184 aa  144  8.000000000000001e-34  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_7011  transcriptional regulator, TetR family  30.89 
 
 
190 aa  52  0.000005  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0394296  n/a   
 
 
-
 
NC_008025  Dgeo_0658  TetR family transcriptional regulator  43.75 
 
 
195 aa  47.8  0.00008  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.609022  normal  0.929409 
 
 
-
 
NC_009664  Krad_2686  transcriptional regulator, TetR family  47.69 
 
 
196 aa  45.4  0.0004  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3382  putative transcriptional regulator, TetR family  36.44 
 
 
202 aa  44.7  0.0007  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.60132 
 
 
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