10 homologs were found in PanDaTox collection
for query gene HY04AAS1_R0013 on replicon NC_011126
Organism: Hydrogenobaculum sp. Y04AAS1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011126  HY04AAS1_R0013  tRNA-Tyr  100 
 
 
87 bp  172  9e-42  Hydrogenobaculum sp. Y04AAS1  Bacteria  hitchhiker  0.000000521392  n/a   
 
 
-
 
NC_010730  SYO3AOP1_R0010  tRNA-Tyr  92.68 
 
 
83 bp  58  0.0000004  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  decreased coverage  0.0000000000000653583  n/a   
 
 
-
 
NC_009441  Fjoh_R0042  tRNA-Tyr  96.67 
 
 
84 bp  52  0.00002  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_R0077  tRNA-Tyr  93.94 
 
 
85 bp  50.1  0.00009  Pseudoalteromonas atlantica T6c  Bacteria  unclonable  0.00000000407125  n/a   
 
 
-
 
NC_009441  Fjoh_R0072  tRNA-Tyr  100 
 
 
81 bp  50.1  0.00009  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_014230  CA2559_t07723  tRNA-Tyr  100 
 
 
82 bp  50.1  0.00009  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_R0023  tRNA-Leu  93.75 
 
 
86 bp  48.1  0.0003  Chelativorans sp. BNC1  Bacteria  normal  0.473121  n/a   
 
 
-
 
NC_008740  Maqu_R0012  tRNA-Tyr  93.75 
 
 
84 bp  48.1  0.0003  Marinobacter aquaeolei VT8  Bacteria  hitchhiker  0.00000365391  n/a   
 
 
-
 
NC_013205  Aaci_R0077  tRNA-Tyr  93.75 
 
 
85 bp  48.1  0.0003  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_R0022  tRNA-Tyr  100 
 
 
86 bp  44.1  0.005  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0256241  normal 
 
 
-
 
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