25 homologs were found in PanDaTox collection
for query gene Gmet_0160 on replicon NC_007517
Organism: Geobacter metallireducens GS-15



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007517  Gmet_0160  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  100 
 
 
123 aa  254  2e-67  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_010803  Clim_0234  pyridoxamine 5'-phosphate oxidase-related FMN-binding  86.99 
 
 
123 aa  229  8.000000000000001e-60  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0206  pyridoxamine 5'-phosphate oxidase-related FMN-binding  67.21 
 
 
123 aa  173  5e-43  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000000260438 
 
 
-
 
NC_008639  Cpha266_0772  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  68.03 
 
 
123 aa  173  6e-43  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2650  pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein  64.75 
 
 
123 aa  173  7e-43  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.00000000000284189  normal  0.238056 
 
 
-
 
NC_012918  GM21_2045  pyridoxamine 5'-phosphate oxidase-related FMN-binding  64.75 
 
 
123 aa  173  7e-43  Geobacter sp. M21  Bacteria  n/a    hitchhiker  6.94638e-17 
 
 
-
 
NC_011146  Gbem_2178  pyridoxamine 5'-phosphate oxidase-related FMN-binding  62.3 
 
 
123 aa  170  5e-42  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_0223  pyridoxamine 5'-phosphate oxidase-related FMN-binding  62.3 
 
 
123 aa  167  6e-41  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2023  pyridoxamine 5'-phosphate oxidase-related FMN-binding protein  59.02 
 
 
122 aa  154  5.0000000000000005e-37  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013517  Sterm_0684  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  44.72 
 
 
124 aa  113  7.999999999999999e-25  Sebaldella termitidis ATCC 33386  Bacteria  unclonable  0.0000000000433082  n/a   
 
 
-
 
NC_013170  Ccur_10330  Pyridoxamine 5'-phosphate oxidase  43.44 
 
 
124 aa  105  2e-22  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013203  Apar_0225  pyridoxamine 5'-phosphate oxidase-related FMN- binding  41.8 
 
 
124 aa  104  4e-22  Atopobium parvulum DSM 20469  Bacteria  normal  0.923127  normal 
 
 
-
 
NC_004116  SAG1728  FMN-binding protein  40.52 
 
 
124 aa  99  2e-20  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.859977  n/a   
 
 
-
 
NC_008530  LGAS_0977  FMN-binding protein  36.59 
 
 
128 aa  88.6  3e-17  Lactobacillus gasseri ATCC 33323  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_1554  pyridoxamine 5'-phosphate oxidase-related FMN-binding  37.4 
 
 
120 aa  84.7  4e-16  Anaeromyxobacter sp. K  Bacteria  normal  0.0568965  n/a   
 
 
-
 
NC_011891  A2cp1_1629  pyridoxamine 5'-phosphate oxidase-related FMN-binding  36.36 
 
 
120 aa  82  0.000000000000002  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_3531  FMN-binding pyridoxamine 5'-phosphate oxidase-related protein  33.61 
 
 
120 aa  78.2  0.00000000000003  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_008527  LACR_2413  FMN-binding protein  42.86 
 
 
80 aa  58.9  0.00000002  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_1426  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  32.46 
 
 
133 aa  45.8  0.0002  Moorella thermoacetica ATCC 39073  Bacteria  unclonable  0.0000000000000163802  normal  0.0247628 
 
 
-
 
NC_007355  Mbar_A3004  hypothetical protein  33.04 
 
 
134 aa  44.3  0.0006  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.146588  hitchhiker  0.00337909 
 
 
-
 
NC_009051  Memar_1441  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  30.23 
 
 
134 aa  43.9  0.0007  Methanoculleus marisnigri JR1  Archaea  normal  0.109181  n/a   
 
 
-
 
NC_011832  Mpal_1577  pyridoxamine 5'-phosphate oxidase-related FMN-binding  32.22 
 
 
134 aa  42  0.002  Methanosphaerula palustris E1-9c  Archaea  normal  0.188247  normal 
 
 
-
 
NC_009712  Mboo_1132  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  30.11 
 
 
134 aa  42.7  0.002  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.492287  normal 
 
 
-
 
NC_008553  Mthe_1045  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  29.7 
 
 
134 aa  42.7  0.002  Methanosaeta thermophila PT  Archaea  normal  0.0950451  n/a   
 
 
-
 
NC_007955  Mbur_1657  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  32.58 
 
 
134 aa  40  0.01  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>