| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1441 |
|---|
| Symbol | |
|---|
| ID | 4847420 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | + |
|---|
| Start bp | 1433841 |
|---|
| End bp | 1434245 |
|---|
| Gene Length | 405 bp |
|---|
| Protein Length | 134 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640116131 |
|---|
| Product | pyridoxamine 5'-phosphate oxidase-related, FMN-binding |
|---|
| Protein accession | YP_001047352 |
|---|
| Protein GI | 126179387 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3576] Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.109181 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGCAC TTACTGAAGA GATGAAGACG GCGTTTCGCA CGATGAAGGC GTTTCCGGTC
GCCACTGCTT CGAAGGACGG CTGGCCGAAC GTGGTGCCGA TCGCGTTCGT CGAGATCGTC
GACGACGAGA CGATCTGGAT CGCGGACAAC TTCATGAAGA AGACGCTCGC AAACGTCCAG
GAGAACCCGA AGGTCTCCAT CTACGTCTGG GGGCCCGAGA CGAAGGGCTG CTTCCAGGTC
AAGGGCGACG TCGAGATCCG GTCGAGCGGC CCGGAGTTCG AGAAGATGCA GTTCACCGTC
CGGGCGAAGA TGGCGAAGGC GCCGGCGAAG ACCCTCCTCA TCATGAAGGT TCGCGAGATC
TACGAGTGCT CCCCCGGACC GAAGGCCGGG GAGAAGATTC TTTAA
|
|---|
| Protein sequence | MVALTEEMKT AFRTMKAFPV ATASKDGWPN VVPIAFVEIV DDETIWIADN FMKKTLANVQ
ENPKVSIYVW GPETKGCFQV KGDVEIRSSG PEFEKMQFTV RAKMAKAPAK TLLIMKVREI
YECSPGPKAG EKIL
|
|---|
| |