18 homologs were found in PanDaTox collection
for query gene DvMF_2023 on replicon NC_011769
Organism: Desulfovibrio vulgaris str. 'Miyazaki F'



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011769  DvMF_2023  pyridoxamine 5'-phosphate oxidase-related FMN-binding protein  100 
 
 
122 aa  248  3e-65  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_012918  GM21_0206  pyridoxamine 5'-phosphate oxidase-related FMN-binding  61.79 
 
 
123 aa  157  3e-38  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000000260438 
 
 
-
 
NC_011146  Gbem_0223  pyridoxamine 5'-phosphate oxidase-related FMN-binding  59.35 
 
 
123 aa  155  1e-37  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0160  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  59.02 
 
 
123 aa  154  5.0000000000000005e-37  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_008639  Cpha266_0772  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  57.72 
 
 
123 aa  154  5.0000000000000005e-37  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2650  pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein  56.91 
 
 
123 aa  153  6e-37  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.00000000000284189  normal  0.238056 
 
 
-
 
NC_011146  Gbem_2178  pyridoxamine 5'-phosphate oxidase-related FMN-binding  60.16 
 
 
123 aa  149  1e-35  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2045  pyridoxamine 5'-phosphate oxidase-related FMN-binding  59.35 
 
 
123 aa  148  3e-35  Geobacter sp. M21  Bacteria  n/a    hitchhiker  6.94638e-17 
 
 
-
 
NC_010803  Clim_0234  pyridoxamine 5'-phosphate oxidase-related FMN-binding  54.1 
 
 
123 aa  142  2e-33  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_013203  Apar_0225  pyridoxamine 5'-phosphate oxidase-related FMN- binding  50 
 
 
124 aa  109  1.0000000000000001e-23  Atopobium parvulum DSM 20469  Bacteria  normal  0.923127  normal 
 
 
-
 
NC_013170  Ccur_10330  Pyridoxamine 5'-phosphate oxidase  41.8 
 
 
124 aa  105  2e-22  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_1629  pyridoxamine 5'-phosphate oxidase-related FMN-binding  47.15 
 
 
120 aa  103  6e-22  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_004116  SAG1728  FMN-binding protein  42.74 
 
 
124 aa  102  1e-21  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.859977  n/a   
 
 
-
 
NC_013517  Sterm_0684  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  43.55 
 
 
124 aa  102  1e-21  Sebaldella termitidis ATCC 33386  Bacteria  unclonable  0.0000000000433082  n/a   
 
 
-
 
NC_011145  AnaeK_1554  pyridoxamine 5'-phosphate oxidase-related FMN-binding  45.53 
 
 
120 aa  101  3e-21  Anaeromyxobacter sp. K  Bacteria  normal  0.0568965  n/a   
 
 
-
 
NC_007760  Adeh_3531  FMN-binding pyridoxamine 5'-phosphate oxidase-related protein  42.28 
 
 
120 aa  89.7  1e-17  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_008530  LGAS_0977  FMN-binding protein  33.33 
 
 
128 aa  80.5  0.000000000000008  Lactobacillus gasseri ATCC 33323  Bacteria  normal  normal 
 
 
-
 
NC_008527  LACR_2413  FMN-binding protein  31.25 
 
 
80 aa  51.2  0.000004  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
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