| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1577 |
|---|
| Symbol | |
|---|
| ID | 7271122 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | + |
|---|
| Start bp | 1623928 |
|---|
| End bp | 1624332 |
|---|
| Gene Length | 405 bp |
|---|
| Protein Length | 134 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643570191 |
|---|
| Product | pyridoxamine 5'-phosphate oxidase-related FMN-binding |
|---|
| Protein accession | YP_002466613 |
|---|
| Protein GI | 219852181 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3576] Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.188247 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTAAACC TGACACCTGA AATGAAGGAC GCGCTATCGA AGATGAAGAT CTCCCCGGTT
GCAACAGCAG CACTGGACGG GACTCCAAAC GTGGTACCGA TCGGCTTCTG TCAACTGGTC
AGTGACGACA CGATCTGGAT CGTCGACAAC TTCATGAACA AGACACTGGC CAACCTCAAA
GAGAATCCGA AGCTCGCTGT CTATGTATGG GGACCTGAGA TCAAGGGGTG TTTCCAGATC
AAGGGCACCG CAGAGATCAT CACCAGCGGG AAAACCTTTG AGGACATGAA GATGATGGTC
AATGAGAAGA AGCCAGGGCT GCCCGCCCGT TCACTGATCG TGATGACGAT CACGGATGTC
TTTGAATGTA TGCCCGGCCC TGCAGCCGGC CAGAAGCTGC TCTGA
|
|---|
| Protein sequence | MVNLTPEMKD ALSKMKISPV ATAALDGTPN VVPIGFCQLV SDDTIWIVDN FMNKTLANLK
ENPKLAVYVW GPEIKGCFQI KGTAEIITSG KTFEDMKMMV NEKKPGLPAR SLIVMTITDV
FECMPGPAAG QKLL
|
|---|
| |