22 homologs were found in PanDaTox collection
for query gene Gbem_2178 on replicon NC_011146
Organism: Geobacter bemidjiensis Bem



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011146  Gbem_2178  pyridoxamine 5'-phosphate oxidase-related FMN-binding  100 
 
 
123 aa  253  6e-67  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2045  pyridoxamine 5'-phosphate oxidase-related FMN-binding  96.75 
 
 
123 aa  248  2e-65  Geobacter sp. M21  Bacteria  n/a    hitchhiker  6.94638e-17 
 
 
-
 
NC_007517  Gmet_2650  pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein  67.48 
 
 
123 aa  187  4e-47  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.00000000000284189  normal  0.238056 
 
 
-
 
NC_007517  Gmet_0160  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  62.3 
 
 
123 aa  170  5e-42  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_010803  Clim_0234  pyridoxamine 5'-phosphate oxidase-related FMN-binding  60.66 
 
 
123 aa  167  4e-41  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0206  pyridoxamine 5'-phosphate oxidase-related FMN-binding  63.41 
 
 
123 aa  166  9e-41  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000000260438 
 
 
-
 
NC_011146  Gbem_0223  pyridoxamine 5'-phosphate oxidase-related FMN-binding  61.79 
 
 
123 aa  163  5.9999999999999996e-40  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008639  Cpha266_0772  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  58.54 
 
 
123 aa  156  7e-38  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2023  pyridoxamine 5'-phosphate oxidase-related FMN-binding protein  60.16 
 
 
122 aa  149  1e-35  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013517  Sterm_0684  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  48.39 
 
 
124 aa  120  5e-27  Sebaldella termitidis ATCC 33386  Bacteria  unclonable  0.0000000000433082  n/a   
 
 
-
 
NC_004116  SAG1728  FMN-binding protein  47.58 
 
 
124 aa  115  3e-25  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.859977  n/a   
 
 
-
 
NC_013170  Ccur_10330  Pyridoxamine 5'-phosphate oxidase  41.8 
 
 
124 aa  100  5e-21  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013203  Apar_0225  pyridoxamine 5'-phosphate oxidase-related FMN- binding  39.34 
 
 
124 aa  95.1  3e-19  Atopobium parvulum DSM 20469  Bacteria  normal  0.923127  normal 
 
 
-
 
NC_011891  A2cp1_1629  pyridoxamine 5'-phosphate oxidase-related FMN-binding  43.2 
 
 
120 aa  91.3  4e-18  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_1554  pyridoxamine 5'-phosphate oxidase-related FMN-binding  41.6 
 
 
120 aa  87.4  6e-17  Anaeromyxobacter sp. K  Bacteria  normal  0.0568965  n/a   
 
 
-
 
NC_007760  Adeh_3531  FMN-binding pyridoxamine 5'-phosphate oxidase-related protein  38.71 
 
 
120 aa  86.3  1e-16  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_008530  LGAS_0977  FMN-binding protein  33.9 
 
 
128 aa  83.6  8e-16  Lactobacillus gasseri ATCC 33323  Bacteria  normal  normal 
 
 
-
 
NC_008527  LACR_2413  FMN-binding protein  41.25 
 
 
80 aa  65.1  0.0000000003  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_008553  Mthe_1045  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  27.93 
 
 
134 aa  43.1  0.001  Methanosaeta thermophila PT  Archaea  normal  0.0950451  n/a   
 
 
-
 
NC_011832  Mpal_1577  pyridoxamine 5'-phosphate oxidase-related FMN-binding  25.98 
 
 
134 aa  43.1  0.001  Methanosphaerula palustris E1-9c  Archaea  normal  0.188247  normal 
 
 
-
 
NC_007644  Moth_1426  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  29.17 
 
 
133 aa  43.5  0.001  Moorella thermoacetica ATCC 39073  Bacteria  unclonable  0.0000000000000163802  normal  0.0247628 
 
 
-
 
NC_009051  Memar_1441  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  29.41 
 
 
134 aa  40.8  0.006  Methanoculleus marisnigri JR1  Archaea  normal  0.109181  n/a   
 
 
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