9 homologs were found in PanDaTox collection
for query gene Gbem_1815 on replicon NC_011146
Organism: Geobacter bemidjiensis Bem



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011146  Gbem_1815  cycloartenol synthase-like protein  100 
 
 
385 aa  781    Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2435  cycloartenol synthase-like protein  94.81 
 
 
385 aa  749    Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_010655  Amuc_0525  cycloartenol synthase-like protein  46.41 
 
 
392 aa  327  2.0000000000000001e-88  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal 
 
 
-
 
NC_014148  Plim_4048  cycloartenol synthase-like protein  37.78 
 
 
348 aa  202  9e-51  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_2604  signal peptide-containing protein  33.59 
 
 
382 aa  158  1e-37  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_6441  hypothetical protein  24.88 
 
 
522 aa  73.6  0.000000000006  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_1752  hypothetical protein  22.91 
 
 
348 aa  54.3  0.000003  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.0554634  normal 
 
 
-
 
NC_009135  MmarC5_0829  hypothetical protein  23.17 
 
 
497 aa  53.5  0.000006  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_009483  Gura_3989  hypothetical protein  27.66 
 
 
2528 aa  46.6  0.0008  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
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