Gene Amuc_0525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0525 
Symbol 
ID6274892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp617112 
End bp618290 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content58% 
IMG OID642612575 
Productcycloartenol synthase-like protein 
Protein accessionYP_001877144 
Protein GI187735032 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAAAT CCGTACTTTC ACTAACGCTG GCCGCCGCAC TGGGCACAGC CTCCTTCGGG 
CAGACCACCC TGACGGCCAT TCCCGGAGAA GCGGCAGCCG CCAAATACGC CTCCATTAGC
CAGGAAATTC TGCGTGCCAT TGAAAAAGGG AACGAATACC TGAAAAGCAA ACAAAATCCG
GAAGGTTACT GGGCCCAGCC GTCCTACCCT GCCCTGACAG CCCTGGCGGT CACCGCCTAC
ATGCGGGACC CCGCCAACCA GGGGAAACCC GTCCCGGAAT ACATCCGGAA GGGGTATGAC
TTCATCCTGA AATCCCAGAA GGAAGACGGC TCCATTTTCA ACCGCGGCAT GTCCTCCTAC
AATACTGCCG TGTGCATGAT GGCCCTGCTG GCCGCCAACA AGGAGGAATA TGCCCCCGCC
ATTCTCAAGG GCCGCGCCTA CCTCATCAAG CAGCAGAACC ACTTTGCCCC GGACAACCCT
TATAACGGCG GCATCGGCTA TGGAGACAAG CAGGCTCCTC CCATTGCAGA CCTCTCCAAT
ACCTCCCTGG CGCTGGAAGC CATTTACTAC TCCCAGAAAC TCGCCAAAGA CGGCAAGTAC
GGTGAACAGC CGGATCTGGA CTGGAACGCC GCCACGGAAT TCATCAACCG TTGCCAGCAA
AACCCTGCCG TAAACAAGGA ACCCTGGGTT TCCAATGACA AATCCCAGCT CGGCGGCTTC
GTGTACCGTC CCGGCGTCTC CAGCGCCAGG GACAAAAAAA GCGCCGCCTT TGACAAAGCG
GAGCCCCCCA AAGCTTACGG CAGCATGACG TATGCGGGCA TGCAGTCCCT TATTTACGCC
AATGTGGATA AAAACGACCC CCGCGTCAAG CTGGCCCTCA AGTGGCTGGA AAACAGCTAC
AGCCTGGACG AAAACCCCGG CATGGGCGTC CAGGGGCTTT ACTACTACTA TCAGGCTATG
TCCAAGGCGC TCAGCGCCAT GGGAATAGAT ACCCTGACGC TGGAAAACGG CCGCAAGGTG
GACTGGCGGG ATGAACTGGC CAACAAGCTC ATTTCCATCC AGAAGAGCGA CGGTTCCTGG
GTGAACACCA ACAACCGCTG GTGGGAGGCG GACCCCGTCC TGGTGACCTC CTACTGCGTG
CTGGCGCTGG AACAGCTCTA CCACTCCATT CCCCGGTAA
 
Protein sequence
MFKSVLSLTL AAALGTASFG QTTLTAIPGE AAAAKYASIS QEILRAIEKG NEYLKSKQNP 
EGYWAQPSYP ALTALAVTAY MRDPANQGKP VPEYIRKGYD FILKSQKEDG SIFNRGMSSY
NTAVCMMALL AANKEEYAPA ILKGRAYLIK QQNHFAPDNP YNGGIGYGDK QAPPIADLSN
TSLALEAIYY SQKLAKDGKY GEQPDLDWNA ATEFINRCQQ NPAVNKEPWV SNDKSQLGGF
VYRPGVSSAR DKKSAAFDKA EPPKAYGSMT YAGMQSLIYA NVDKNDPRVK LALKWLENSY
SLDENPGMGV QGLYYYYQAM SKALSAMGID TLTLENGRKV DWRDELANKL ISIQKSDGSW
VNTNNRWWEA DPVLVTSYCV LALEQLYHSI PR