16 homologs were found in PanDaTox collection
for query gene Gbem_1592 on replicon NC_011146
Organism: Geobacter bemidjiensis Bem



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011146  Gbem_1592  sulfate transporter/antisigma-factor antagonist STAS  100 
 
 
120 aa  244  3e-64  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2621  sulfate transporter/antisigma-factor antagonist STAS  95.8 
 
 
120 aa  236  1e-61  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009483  Gura_2995  Sulfate transporter/antisigma-factor antagonist STAS  43.56 
 
 
120 aa  97.1  8e-20  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2429  anti-sigma-factor antagonist domain-containing protein  48 
 
 
120 aa  91.3  4e-18  Geobacter metallireducens GS-15  Bacteria  normal  0.0188402  normal 
 
 
-
 
NC_011146  Gbem_2941  Sulfate transporter/antisigma-factor antagonist STAS  36.08 
 
 
116 aa  76.3  0.0000000000001  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1281  anti-sigma-factor antagonist  35.58 
 
 
116 aa  75.9  0.0000000000002  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00946489 
 
 
-
 
NC_008609  Ppro_2712  hypothetical protein  28.81 
 
 
130 aa  60.5  0.000000009  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_1605  anti-sigma-factor antagonist domain-containing protein  27.03 
 
 
115 aa  58.5  0.00000003  Pelobacter propionicus DSM 2379  Bacteria  normal  0.573914  n/a   
 
 
-
 
NC_008576  Mmc1_0632  anti-sigma-factor antagonist  36.05 
 
 
105 aa  53.5  0.0000009  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_1740  sulfate transporter/antisigma-factor antagonist STAS  27.27 
 
 
118 aa  48.1  0.00004  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.000969035  n/a   
 
 
-
 
NC_008751  Dvul_1645  putative CheA signal transduction histidine kinases  44.12 
 
 
731 aa  43.9  0.0007  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.954739 
 
 
-
 
NC_011769  DvMF_0237  putative CheA signal transduction histidine kinase  42.42 
 
 
669 aa  43.9  0.0008  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.0874018 
 
 
-
 
NC_010524  Lcho_3797  anti-sigma-factor antagonist  40.54 
 
 
110 aa  42.7  0.002  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007298  Daro_1141  Sulfate transporter/antisigma-factor antagonist STAS  37.5 
 
 
101 aa  42  0.003  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_1120  hypothetical protein  34.78 
 
 
125 aa  41.2  0.005  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_013510  Tcur_0872  anti-sigma-factor antagonist  32.93 
 
 
120 aa  40.4  0.009  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
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