11 homologs were found in PanDaTox collection
for query gene Franean1_4490 on replicon NC_009921
Organism: Frankia sp. EAN1pec



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009921  Franean1_4490  ethyl tert-butyl ether degradation EthD  100 
 
 
131 aa  266  8.999999999999999e-71  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009427  Saro_3492  hypothetical protein  40 
 
 
119 aa  71.2  0.000000000004  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.662132  n/a   
 
 
-
 
NC_009511  Swit_3331  ethyl tert-butyl ether degradation EthD  43.59 
 
 
120 aa  65.5  0.0000000002  Sphingomonas wittichii RW1  Bacteria  normal  hitchhiker  0.00220158 
 
 
-
 
NC_009427  Saro_3720  ethyl tert-butyl ether degradation EthD  32.52 
 
 
274 aa  63.9  0.0000000007  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.81836  n/a   
 
 
-
 
NC_009921  Franean1_3852  ethyl tert-butyl ether degradation EthD  29.92 
 
 
136 aa  60.5  0.000000008  Frankia sp. EAN1pec  Bacteria  normal  0.0818324  normal 
 
 
-
 
NC_009921  Franean1_5806  ethyl tert-butyl ether degradation EthD  29.91 
 
 
119 aa  53.1  0.000001  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_1862  hypothetical protein  29.46 
 
 
249 aa  52.4  0.000002  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.530634 
 
 
-
 
NC_013093  Amir_2840  Ethyl tert-butyl ether degradation EthD  41.33 
 
 
111 aa  48.1  0.00004  Actinosynnema mirum DSM 43827  Bacteria  normal  0.568701  n/a   
 
 
-
 
NC_009511  Swit_2009  ethyl tert-butyl ether degradation EthD  26.77 
 
 
125 aa  43.5  0.001  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_3831  Ethyl tert-butyl ether degradation EthD  33.33 
 
 
113 aa  42  0.003  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.654041 
 
 
-
 
NC_010335  Caul_5271  ethyl tert-butyl ether degradation EthD  25.44 
 
 
113 aa  40.4  0.008  Caulobacter sp. K31  Bacteria  normal  0.357656  hitchhiker  0.000208925 
 
 
-
 
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