9 homologs were found in PanDaTox collection
for query gene Francci3_4098 on replicon NC_007777
Organism: Frankia sp. CcI3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007777  Francci3_4098  actinorhodin polyketide synthase bifunctional cyclase/dehydratase  100 
 
 
319 aa  640    Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_1222  actinorhodin polyketide synthase bifunctional cyclase/dehydratase  49.51 
 
 
314 aa  278  7e-74  Thermobifida fusca YX  Bacteria  normal  0.521023  n/a   
 
 
-
 
NC_009380  Strop_2197  cyclase/dehydrase  48.06 
 
 
319 aa  265  5.999999999999999e-70  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2780  cyclase/dehydrase  46.25 
 
 
340 aa  253  4.0000000000000004e-66  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0168913  n/a   
 
 
-
 
NC_007777  Francci3_4143  actinorhodin polyketide synthase bifunctional cyclase/dehydratase  44.05 
 
 
318 aa  252  5.000000000000001e-66  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_3550  cyclase/dehydrase  42.38 
 
 
316 aa  252  6e-66  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.164951  normal 
 
 
-
 
NC_013131  Caci_6488  actinorhodin polyketide synthase bifunctional cyclase/dehydratase  43.63 
 
 
330 aa  227  2e-58  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_4151  actinorhodin polyketide synthase bifunctional cyclase/dehydratase  32.79 
 
 
315 aa  139  3.9999999999999997e-32  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_1089  cyclase/dehydrase  31.68 
 
 
151 aa  50.4  0.00004  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
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