13 homologs were found in PanDaTox collection
for query gene Dshi_2457 on replicon NC_009952
Organism: Dinoroseobacter shibae DFL 12



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009952  Dshi_2457  hypothetical protein  100 
 
 
866 aa  1730    Dinoroseobacter shibae DFL 12  Bacteria  normal  0.0520379  normal 
 
 
-
 
NC_013132  Cpin_3932  hypothetical protein  28.06 
 
 
921 aa  214  3.9999999999999995e-54  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.0926169 
 
 
-
 
NC_009441  Fjoh_3159  hypothetical protein  25.64 
 
 
900 aa  186  2.0000000000000003e-45  Flavobacterium johnsoniae UW101  Bacteria  normal  0.0980935  n/a   
 
 
-
 
NC_007912  Sde_1046  response regulator receiver /GGDEF/PAS/PAC domain-containing protein  26.05 
 
 
895 aa  182  2.9999999999999997e-44  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_0364  hypothetical protein  28.81 
 
 
821 aa  181  4e-44  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_010830  Aasi_1083  hypothetical protein  23.77 
 
 
831 aa  179  2e-43  Candidatus Amoebophilus asiaticus 5a2  Bacteria  n/a    normal 
 
 
-
 
NC_007954  Sden_2998  hypothetical protein  27.69 
 
 
906 aa  166  1.0000000000000001e-39  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_3605  hypothetical protein  29.79 
 
 
863 aa  159  2e-37  Dechloromonas aromatica RCB  Bacteria  normal  unclonable  0.0000000881284 
 
 
-
 
NC_013132  Cpin_5245  hypothetical protein  28 
 
 
2204 aa  150  1.0000000000000001e-34  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.291359  hitchhiker  0.0000299325 
 
 
-
 
NC_013037  Dfer_0666  hypothetical protein  29.46 
 
 
1193 aa  119  3e-25  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.447807  normal 
 
 
-
 
NC_011146  Gbem_2554  hypothetical protein  29.28 
 
 
1131 aa  105  4e-21  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_0671  hypothetical protein  27.15 
 
 
831 aa  102  4e-20  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1677  hypothetical protein  28.16 
 
 
1131 aa  94  1e-17  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
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