| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1046 |
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| Symbol | |
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| ID | 3967800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1335598 |
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| End bp | 1338285 |
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| Gene Length | 2688 bp |
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| Protein Length | 895 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637920113 |
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| Product | response regulator receiver /GGDEF/PAS/PAC domain-containing protein |
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| Protein accession | YP_526520 |
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| Protein GI | 90020693 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACCG ATATGACCAT CGCTAAAAAA AGCAACCGCC CCAAAGGGTT AGATTACAAA
CAACTCTACG ATTTGGGTAT GGCTCGCATA CGCAGCTTAT GTAGCGAAAA GTGGACAGAT
TACAACACCC ACGACCCAGG TATTACCCTA TTAGAAACAC TGTGTTACGC CATTACCGAT
ATGAGTTATC GGGCGCAGAT GCCGGTAAAA GATTTATTGG CAAGCGAGCA TAACAATATA
GAAAGTATGC GACAGCAGTT TTTTACTGCG CGACAAATTC TGCCAGCCAA AGCGCTTACA
AGTCTAGATT ATAGAAAACT GCTTATCGAC TTGCCCGGCG TTCAAAATGC GTGGCTGCAA
AAAGCAGAGC AACTCTACTT TTTAAATAAA CCTCTGAAAA AATTAGAGAC GGAGCACCCC
GGTACACCAG GGGTAGAAGA AGTGTCTCTC TCTGGCTTAT ACAACATACT TATCGATTAT
GTGCCTGGCA AAACACAGCC GCAGAAGCAA GCCATACTCA AGGCGGTGGA TGAGCGGCTG
CAAGCTAACC GCAACCTGTG TGAAGACTTT GTATCCATCG ATGAAGTAGA TACACAGCCA
TTTATTTTGT GTGGCGAAAT AGATTTAAGG TCGGATGCAG ATATTAACGA AGTGTACGCA
CAAGTTTTAT ACCAAGTTCA ACAATATCTG GCTCCAGTAG TTAAAAACTA TACGCTCGAA
GAGATGCTGG CTAAACAAGA TGCCAATGGC AATGCATATT CCGTAGACGA TATCTTTGAC
GGGCCGCTAC TCGATTGCGG CTTTATAGAT ACGCAAGAGC TAGCGCAAGC CGAGTTGCGC
ACAGATATTC GCCTGTCGGA TATTATTAAT ATTATTGTCG ATATTCCAGG CGTAGTGGCC
GTAAGGGATT TAATAATAAA CCCAGTTGGT ACAGAGCAAG TGCTTGCAAA TAAATGGTTG
CAAAGTGTGG CTTTGGGTAA AAAACCAGTA TTAGATAACG AAAAAACAAG GCTTATATTC
TACAAGCGTG GTATGCCCAT AAGCGCAAGT AAAACAGCGG CAATCGCGCA GGCGCAATTG
TTGGTAGATG CGCAACTTAG CAAGCTAGAA ACCCCTGTGG AATATGACTT TGATATACCC
ATTGGCCGCT ATCGCGCCGG TGGTGCCTAT CATTCATTAC AACACCACTT ACCAGAAGTT
TACGGGTTAA GTGATGTAGG GTTACCGCCC AATGCAACCG CGCAACGCAA GGCTCAGGCA
TTACAGCTGA AAGGCTATTT GCTCTTTTTT GAGCAATTAC TTGCTAACTA CTTGGCACAA
CTAAGCCATG TGCGCGATAT TTTTTCTAGT GATGCGAGTA AGAGTCGTAC TAACTTTTAT
CAAGCAGTTA CCGACTTTGC AGATTGGCAA AAAGTCTATG CCCATGCAGA CCCAGAGCAG
GCAATGCTCG CCACCATAGA TGACAGCGCA CGGGGCGTGA CCAGAAAAAA CATGTTCCTC
GATAACCTTA TTGCGCGCTT TGCCGAAGAA TTTAGTGAGT TTGCCAACGT AATGTACGGG
GCCTTTGGGG CGTCGCCTAT GGCGTTAATT CACTATAAGT GTGACTTTAT CAATGCTTAC
CCTTCTATTA GTGCCGCGCG CGGCCTGGGT TACAACCAGA GCCTCACCCA GCTTACAGAC
ATATGGAATA GCAATAATAT TTCTGGCATG GAGCAGCGTT TGTGCAAATT GCTGGGCATA
GCAAATGCAA CTCGCAGAAA CTTAAGCGAT GTGGCTTACG ACATTTATGC CGAACTTGAC
GCAACACCAG ATGACGAGTT TCGTTTTCGT ATTCGCGATA AAGTGAGTGG ACATATTCTG
CTAAGCAGCA GCACCAAATA TGTAACGCAG GCCGATGCGC AGGCAGAAAT GCGCCGAGCC
ATAATGTTTG GCAAGCTACA TGCTAGCTAC CAAATTAAGC AGGCAAGTAA TGGTAAGTAT
TATTTTAATA TTGTGGATGA TACCGAGGAA GTCATCGCCA GACGCATAGA GTACTTTACT
AGCCAAAGTG AACTCGAAGC CGCCATAGCC GAAGTGGTTG CCTATTTAAA TAGTGCGTAT
AGCGATGAAG GCATGTACCT CATAGAAAAT ATGCTATTGC GCCCACTGCA AGAAGATGAT
CCCTTCTTAC CCGTATGTGT TGATGTTAAC TGCGAAGAGT GCGCCGATCA CGACCCTTAT
TCGTATCGCA TTCATATTAT ATTGCCGGCT TTTGGCAGCC GTTTTAGCAA TATGGATTTT
AGGCGCTACG CCGAAAGCCT AATTCGCAGT GAGGTACCTG CGCATATACT GCCCAAAATA
TGCTGGGTAA ACAAAGACGA CATGGCCACC TTAGAAAAAC TTTATCAAGA CTGGCTAAAA
CTGAAGCATG GCCGCACCAG CGCGCAGCGC ACCAAAAAGC TTACAGATTT TATACGCGCA
CTATATGCGG CAAAAAATGT ATATCCAGGA GAGCGATTAC ACGATTGTGA TGCCGACGAA
GAAAAAAATA GATTCGTATT AGGGCGCACA GTAATTGGTT CCGTTGCAAA CAACGCACAA
GCTAGTGAAC CAGAACCAGA ACCAGAACCA GAACCAGAAC CAGAACCAGA ACCAGAACCA
GAACCAGAAC CAGAACCAGA ACCAGAACCA GAACCGCCTT TAAATTAA
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| Protein sequence | MQTDMTIAKK SNRPKGLDYK QLYDLGMARI RSLCSEKWTD YNTHDPGITL LETLCYAITD
MSYRAQMPVK DLLASEHNNI ESMRQQFFTA RQILPAKALT SLDYRKLLID LPGVQNAWLQ
KAEQLYFLNK PLKKLETEHP GTPGVEEVSL SGLYNILIDY VPGKTQPQKQ AILKAVDERL
QANRNLCEDF VSIDEVDTQP FILCGEIDLR SDADINEVYA QVLYQVQQYL APVVKNYTLE
EMLAKQDANG NAYSVDDIFD GPLLDCGFID TQELAQAELR TDIRLSDIIN IIVDIPGVVA
VRDLIINPVG TEQVLANKWL QSVALGKKPV LDNEKTRLIF YKRGMPISAS KTAAIAQAQL
LVDAQLSKLE TPVEYDFDIP IGRYRAGGAY HSLQHHLPEV YGLSDVGLPP NATAQRKAQA
LQLKGYLLFF EQLLANYLAQ LSHVRDIFSS DASKSRTNFY QAVTDFADWQ KVYAHADPEQ
AMLATIDDSA RGVTRKNMFL DNLIARFAEE FSEFANVMYG AFGASPMALI HYKCDFINAY
PSISAARGLG YNQSLTQLTD IWNSNNISGM EQRLCKLLGI ANATRRNLSD VAYDIYAELD
ATPDDEFRFR IRDKVSGHIL LSSSTKYVTQ ADAQAEMRRA IMFGKLHASY QIKQASNGKY
YFNIVDDTEE VIARRIEYFT SQSELEAAIA EVVAYLNSAY SDEGMYLIEN MLLRPLQEDD
PFLPVCVDVN CEECADHDPY SYRIHIILPA FGSRFSNMDF RRYAESLIRS EVPAHILPKI
CWVNKDDMAT LEKLYQDWLK LKHGRTSAQR TKKLTDFIRA LYAAKNVYPG ERLHDCDADE
EKNRFVLGRT VIGSVANNAQ ASEPEPEPEP EPEPEPEPEP EPEPEPEPEP EPPLN
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