14 homologs were found in PanDaTox collection
for query gene DhcVS_1245 on replicon NC_013552
Organism: Dehalococcoides sp. VS



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013552  DhcVS_1245  hypothetical protein  100 
 
 		 82 aa  165  2e-40  Dehalococcoides sp. VS  Bacteria  normal  0.265358  n/a   
 
 
-
 
NC_002936  DET1468  hypothetical protein  95.83 
 
 		 71 aa  98.6  3e-20  Dehalococcoides ethenogenes 195  Bacteria  normal  0.337511  n/a   
 
 
-
 
NC_009455  DehaBAV1_1269  FmdB family regulatory protein  95.83 
 
 		 71 aa  98.6  3e-20  Dehalococcoides sp. BAV1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010424  Daud_1422  FmdB family regulatory protein  41.1 
 
 		 70 aa  52.8  0.000002  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  1  n/a   
 
 
-
 
NC_008148  Rxyl_2441  FmdB transcriptional regulator  52.17 
 
 		 77 aa  45.1  0.0003  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_013552  DhcVS_640  hypothetical protein  52.27 
 
 		 128 aa  44.7  0.0004  Dehalococcoides sp. VS  Bacteria  decreased coverage  0.00000000000170615  n/a   
 
 
-
 
NC_009455  DehaBAV1_0665  FmdB family regulatory protein  50 
 
 		 128 aa  44.3  0.0006  Dehalococcoides sp. BAV1  Bacteria  unclonable  0.000000000563996  n/a   
 
 
-
 
NC_002936  DET0734  hypothetical protein  47.73 
 
 		 128 aa  43.1  0.001  Dehalococcoides ethenogenes 195  Bacteria  unclonable  0.000000750313  n/a   
 
 
-
 
NC_013216  Dtox_2257  regulatory protein, FmdB family  41.67 
 
 		 61 aa  43.5  0.001  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  hitchhiker  0.00405255 
 
 
-
 
NC_011831  Cagg_2774  regulatory protein, FmdB family  35.62 
 
 		 78 aa  42  0.003  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013216  Dtox_0773  regulatory protein, FmdB family  33.33 
 
 		 84 aa  42  0.003  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011004  Rpal_1449  regulatory protein, FmdB family  42.86 
 
 		 114 aa  41.6  0.004  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0500007  n/a   
 
 
-
 
NC_011831  Cagg_0322  regulatory protein, FmdB family  40.43 
 
 		 78 aa  40.8  0.006  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.71311  normal  0.241427 
 
 
-
 
NC_009972  Haur_2075  hypothetical protein  34.04 
 
 		 115 aa  40.4  0.009  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0405722  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>