13 homologs were found in PanDaTox collection
for query gene Dgeo_2275 on replicon NC_008025
Organism: Deinococcus geothermalis DSM 11300



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008025  Dgeo_2275  hypothetical protein  100 
 
 		 266 aa  546  1e-154  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.08442  normal  1 
 
 
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NC_007643  Rru_A1856  (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA  29.05 
 
 		 715 aa  51.2  0.00002  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.709628  n/a   
 
 
-
 
NC_013037  Dfer_4577  (p)ppGpp synthetase I, SpoT/RelA  26.42 
 
 		 762 aa  47  0.0004  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  0.657251 
 
 
-
 
NC_014158  Tpau_2670  RelA/SpoT domain protein  27.54 
 
 		 261 aa  46.6  0.0004  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
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NC_008025  Dgeo_1428  RelA/SpoT  26.74 
 
 		 362 aa  46.2  0.0005  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  0.228493 
 
 
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NC_013517  Sterm_1186  (p)ppGpp synthetase I, SpoT/RelA  26.35 
 
 		 721 aa  45.8  0.0007  Sebaldella termitidis ATCC 33386  Bacteria  unclonable  0.0000000400543  n/a   
 
 
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NC_013730  Slin_1611  (p)ppGpp synthetase I, SpoT/RelA  24.07 
 
 		 758 aa  44.7  0.001  Spirosoma linguale DSM 74  Bacteria  normal  0.495196  normal  0.405077 
 
 
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NC_007908  Rfer_2071  (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA  28.38 
 
 		 751 aa  44.7  0.002  Rhodoferax ferrireducens T118  Bacteria  unclonable  0.0000208286  n/a   
 
 
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NC_013530  Xcel_2232  RelA/SpoT domain protein  29.77 
 
 		 271 aa  44.7  0.002  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.231688  n/a   
 
 
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NC_010184  BcerKBAB4_4192  RelA/SpoT domain-containing protein  28.24 
 
 		 216 aa  43.1  0.005  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  n/a   
 
 
-
 
NC_003909  BCE_4425  hypothetical protein  28.24 
 
 		 216 aa  42  0.009  Bacillus cereus ATCC 10987  Bacteria  normal  0.168172  n/a   
 
 
-
 
NC_011658  BCAH187_A4476  hypothetical protein  28.24 
 
 		 216 aa  42  0.009  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_010505  Mrad2831_4146  RelA/SpoT domain-containing protein  25.52 
 
 		 337 aa  42  0.01  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.0405555  normal  1 
 
 
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