| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2071 |
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| Symbol | |
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| ID | 3961022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 2244661 |
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| End bp | 2246916 |
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| Gene Length | 2256 bp |
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| Protein Length | 751 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637916891 |
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| Product | (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA |
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| Protein accession | YP_523327 |
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| Protein GI | 89900856 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000208286 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACCC TGTCCGCCGA GCCAACGGGC GCGGCATCTT TGGCGCAGCC CTTGCCGCAG
TTGCTGACCG CCACGGCGCA GACTTTGCCG GAGCAGTCCC ATGCGCTGGC GCGTGCTCGC
GCGTTTGCCG AGCCGCTGCT GGCCAGCGAG ACGCTCGACA CCGGCGAGAA CACGCTGGCC
CATGCCGACG CGGTCGCGGC CATTCTCAGG ATTATTGGCG GTTCCGAGGC GATGCAGGCC
GCCAGTTACC TGGTTTATGC CTGCGACCAC TTGAACAAAC CCCAAGAGGT GATCGCCAAG
GCGTTTGGTG ACAACTTTGC CGCGCTGGCG GTAGAAACCA CCAAGCTGGT GCGGGTGCAA
CGCCAGGCGC GCCAGGCGCA AGTGGCCAGC GAGCGCGCCG CCACGGGCAT CCCGATGGCG
CAAACAGCGG CCGCCCAAAC CGAGAATGTG CGCAAGATGC TGCTCGCCTT TTCACGCGAC
TTGCGCGTGG TGATGCTGCG GCTGGCCTCG CGCCTGCAGA CTTTGCGCTT TTTTGCCGCT
GCCCGCCAGG CCGCGCCGCC CGGTGTGGCG CGCGAGGCCT TGCAGGTGTT TGCGCCGCTG
GCCAACCGGC TGGGCATATG GGAAATCAAG TGGGAGATGG AAGACCTGGC GTTTCGTTTC
CTGGAGCCTG ATGTCTACCG CCAAGTGGCG CGTCTGCTCG ATGAAAAGCG CTCCGAGCGC
GAGTTGCACG TTGAGCAATT GCGGCAACAA CTGGAGTCGG ACCTGAAGGC GCAGGGCATG
AGCGTCACGG TGCAGGGGCG ACCCAAACAC ATCTTTAGCA TCGTCAAGAA GATGCGCGGC
AAATCGCTTG CATTTGACCA GGTCCATGAC ATTCGGGCGC TGCGCATTGT GGTTGCAGAC
ATTGCGGACT GCTACGCCGC CTTGAGCTGG GTACACAGCC AGTTCACACC GATCGCCGAA
GAATTTGACG ACTACATTGC CAAACCCAAG GCCAACGGCT ACCAGTCCTT GCACACAGTG
GTGCGCGATG CGGCGGGGCT GCCGATCGAG ATCCAGATTC GCACCCAGGC CATGCACGAC
CATGCCGAGC ACGGCGTGGC GGCGCATTGG GCCTACAAGG AGGCAGGTGT CAAAGGCTAC
GCTGGCGTCT CGGCCACCAG TTCCTACGAC GCCAAGATTG CCGTGCTGCG CCAGTTGCTG
GCGTGGGAGC GTGATCTGTC GGGCACTTCG GCGCAGGATG TCGGCCTGGA TGACCGTATT
TATGTCTTGA CGCCCGAGGC GGCCATTGTG GAGCTGCCGC AAGGCGCCAC CGCCGTCGAC
TTTGCCTACA GCGTGCACAC CGATCTGGGG CACCGCTGCC GCGGAGCCCG AATTGATGGC
GTGATGGTGC CTTTGAACAC GCCGCTAAAA AATGGCCAGA CAGTGGAAGT GACGGTGGCC
AAGGAGGGCG GGCCGTCGCG CGACTGGCTG ATGGCAGAAC AAGGCTACCT GGTGAGCCAC
CGGGCCCGTT CCAAAGTGCG CGCCTGGTTC AACGCCCAGG CCCTGCATGA AACGGTTGCC
AAAGGCCGCG AGGCGGTGGA GAAACTGCTG CAGCGCGAGG GTAAGACAGC GCTCAAATTG
CAGGACCTGG CCGCGCAACT GGGGTTTAAC TCGGCCGACG ATCTGTTTGA AGTGGTGGGC
AAGGACGAGT TCTCGCTGCG TAATATCGAG ACCCTGCTGC ACCCGCCCGA GCCGGTGCAG
GCCGACGATG GGCCGCTGCT GAAGAAGCCG CGCAGCGCCA GCAACCCGGC CAAGGGTGGC
TTGTTGGTGG TGGGTGTTGA TTCATTGATG ACGCAGTTGG CCAAGTGCTG CAAACCGGCC
CCGCCTGACC CGATTTGTGG CTTTGTCACC CGCGGCAAAG GGGTCAGCGT GCACCGTGCC
GATTGCTCCA ACCTGCGCGA GATGATTGCC CAAAATGGCG AGCGTGTGAT CGAGGTGGAA
TGGGGCCAGC CCCCAGGCAG TGCGAATGGA TCGGCGGGCA GCGCGGTGTA CCCGGTGGAC
GTGGCGGTGC ACGCCATGGA CAGGCAGGGC TTGCTGCACG ACATTTCCGA GGTTTTCACC
AAGGAAAAGA TGAACGTGAT CGGTGTGCAG ACGCAGTCCG TCAAGGGCAT CGCCTTGATG
ACTTTCACGG TTGAAGTGTC GGATGCCGGA CGGCTGCACA AGGTGCTGGG TGTGGTAGCG
GAGTTGCCGG GCGTGCGCTC GGCGCGGCGG CGTTGA
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| Protein sequence | MKTLSAEPTG AASLAQPLPQ LLTATAQTLP EQSHALARAR AFAEPLLASE TLDTGENTLA
HADAVAAILR IIGGSEAMQA ASYLVYACDH LNKPQEVIAK AFGDNFAALA VETTKLVRVQ
RQARQAQVAS ERAATGIPMA QTAAAQTENV RKMLLAFSRD LRVVMLRLAS RLQTLRFFAA
ARQAAPPGVA REALQVFAPL ANRLGIWEIK WEMEDLAFRF LEPDVYRQVA RLLDEKRSER
ELHVEQLRQQ LESDLKAQGM SVTVQGRPKH IFSIVKKMRG KSLAFDQVHD IRALRIVVAD
IADCYAALSW VHSQFTPIAE EFDDYIAKPK ANGYQSLHTV VRDAAGLPIE IQIRTQAMHD
HAEHGVAAHW AYKEAGVKGY AGVSATSSYD AKIAVLRQLL AWERDLSGTS AQDVGLDDRI
YVLTPEAAIV ELPQGATAVD FAYSVHTDLG HRCRGARIDG VMVPLNTPLK NGQTVEVTVA
KEGGPSRDWL MAEQGYLVSH RARSKVRAWF NAQALHETVA KGREAVEKLL QREGKTALKL
QDLAAQLGFN SADDLFEVVG KDEFSLRNIE TLLHPPEPVQ ADDGPLLKKP RSASNPAKGG
LLVVGVDSLM TQLAKCCKPA PPDPICGFVT RGKGVSVHRA DCSNLREMIA QNGERVIEVE
WGQPPGSANG SAGSAVYPVD VAVHAMDRQG LLHDISEVFT KEKMNVIGVQ TQSVKGIALM
TFTVEVSDAG RLHKVLGVVA ELPGVRSARR R
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