72 homologs were found in PanDaTox collection
for query gene Coch_0242 on replicon NC_013162
Organism: Capnocytophaga ochracea DSM 7271



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013162  Coch_0242  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  100 
 
 		 224 aa  459  9.999999999999999e-129  Capnocytophaga ochracea DSM 7271  Bacteria  normal  0.463951  n/a   
 
 
-
 
NC_014230  CA2559_04700  Succinate dehydrogenase, cytochrome b558 subunit  57.87 
 
 		 239 aa  250  1e-65  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.142799  n/a   
 
 
-
 
NC_009441  Fjoh_0677  succinate dehydrogenase/fumarate reductase cytochrome b subunit  54.09 
 
 		 221 aa  249  2e-65  Flavobacterium johnsoniae UW101  Bacteria  normal  0.330554  n/a   
 
 
-
 
NC_008255  CHU_2472  succinate dehydrogenase subunit C  41.3 
 
 		 234 aa  133  3e-30  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  1  normal  0.088296 
 
 
-
 
NC_008639  Cpha266_0102  succinate dehydrogenase subunit C  34.11 
 
 		 242 aa  131  6.999999999999999e-30  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  1  n/a   
 
 
-
 
NC_013061  Phep_0210  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  42.35 
 
 		 209 aa  130  2.0000000000000002e-29  Pedobacter heparinus DSM 2366  Bacteria  normal  1  normal  0.178557 
 
 
-
 
NC_002950  PG1616  hypothetical protein  31.67 
 
 		 230 aa  124  9e-28  Porphyromonas gingivalis W83  Bacteria  n/a    normal  1 
 
 
-
 
NC_007512  Plut_2082  succinate dehydrogenase, cytochrome b558 subunit  33.18 
 
 		 217 aa  119  3.9999999999999996e-26  Chlorobium luteolum DSM 273  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013037  Dfer_3969  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  38.35 
 
 		 223 aa  116  3e-25  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.539858  normal  0.938313 
 
 
-
 
NC_011060  Ppha_2853  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  33.64 
 
 		 220 aa  113  3e-24  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013730  Slin_5011  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  36.41 
 
 		 231 aa  111  1.0000000000000001e-23  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013132  Cpin_6536  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  35.11 
 
 		 229 aa  109  3e-23  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0147302  normal  0.421545 
 
 
-
 
NC_010803  Clim_2443  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  31.63 
 
 		 231 aa  108  6e-23  Chlorobium limicola DSM 245  Bacteria  normal  1  n/a   
 
 
-
 
NC_013061  Phep_3265  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  34.23 
 
 		 224 aa  103  2e-21  Pedobacter heparinus DSM 2366  Bacteria  normal  0.0102296  normal  0.074852 
 
 
-
 
NC_009483  Gura_3257  succinate dehydrogenase/fumarate reductase cytochrome b subunit  31.02 
 
 		 219 aa  98.2  8e-20  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000000103645  n/a   
 
 
-
 
NC_008609  Ppro_2483  succinate dehydrogenase/fumarate reductase cytochrome b subunit  28.38 
 
 		 221 aa  92.4  5e-18  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.00000000324383  n/a   
 
 
-
 
NC_013757  Gobs_1054  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  30.37 
 
 		 231 aa  91.7  9e-18  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_010814  Glov_2214  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  27.96 
 
 		 222 aa  90.9  1e-17  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.00000205713  n/a   
 
 
-
 
NC_011145  AnaeK_2722  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  28.84 
 
 		 221 aa  88.6  7e-17  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_007760  Adeh_2636  succinate dehydrogenase subunit C  28.5 
 
 		 232 aa  87.8  1e-16  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.189962  n/a   
 
 
-
 
NC_011891  A2cp1_2817  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  28.37 
 
 		 221 aa  87.8  1e-16  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.893711  n/a   
 
 
-
 
NC_007517  Gmet_2397  succinate dehydrogenase subunit C  27.54 
 
 		 220 aa  87  2e-16  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.000000000000157614  normal  1 
 
 
-
 
NC_002939  GSU1176  fumarate reductase, cytochrome b subunit, putative  28.5 
 
 		 220 aa  86.3  3e-16  Geobacter sulfurreducens PCA  Bacteria  decreased coverage  0.000804206  n/a   
 
 
-
 
NC_013510  Tcur_1123  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  25.56 
 
 		 232 aa  84.3  0.000000000000001  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_007514  Cag_1935  succinate dehydrogenase, cytochrome b558 subunit  32.08 
 
 		 221 aa  84  0.000000000000002  Chlorobium chlorochromatii CaD3  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_0912  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  27.14 
 
 		 221 aa  81.6  0.000000000000008  Geobacter sp. M21  Bacteria  n/a    hitchhiker  8.63584e-33 
 
 
-
 
NC_013131  Caci_0384  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  25.23 
 
 		 234 aa  81.6  0.000000000000009  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.556008  normal  0.820054 
 
 
-
 
NC_008699  Noca_3551  succinate dehydrogenase subunit C  28.77 
 
 		 233 aa  81.3  0.00000000000001  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_011146  Gbem_3334  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  26.67 
 
 		 221 aa  79.7  0.00000000000003  Geobacter bemidjiensis Bem  Bacteria  decreased coverage  0.0000562871  n/a   
 
 
-
 
NC_013440  Hoch_5881  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  29.13 
 
 		 228 aa  79  0.00000000000006  Haliangium ochraceum DSM 14365  Bacteria  normal  0.0369538  normal  1 
 
 
-
 
NC_013169  Ksed_23340  succinate dehydrogenase/fumarate reductase cytochrome b subunit, b558 family  27.23 
 
 		 231 aa  77  0.0000000000002  Kytococcus sedentarius DSM 20547  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007760  Adeh_2934  succinate dehydrogenase subunit C  25.82 
 
 		 221 aa  76.3  0.0000000000003  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_007513  Syncc9902_0586  succinate dehydrogenase cytochrome b-556 subunit  29.25 
 
 		 208 aa  76.3  0.0000000000004  Synechococcus sp. CC9902  Bacteria  normal  0.59811  n/a   
 
 
-
 
NC_009675  Anae109_2602  succinate dehydrogenase/fumarate reductase cytochrome b subunit  29.63 
 
 		 230 aa  76.3  0.0000000000004  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010655  Amuc_0986  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  31.46 
 
 		 233 aa  75.5  0.0000000000005  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  0.190764  normal  0.959903 
 
 
-
 
NC_009972  Haur_1734  succinate dehydrogenase/fumarate reductase cytochrome b subunit  27.55 
 
 		 223 aa  74.3  0.000000000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.776584  n/a   
 
 
-
 
NC_011831  Cagg_1576  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  28.16 
 
 		 239 aa  74.3  0.000000000001  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.790909  normal  1 
 
 
-
 
NC_007777  Francci3_3465  succinate dehydrogenase subunit C  23.42 
 
 		 246 aa  74.7  0.000000000001  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011891  A2cp1_3127  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  25.35 
 
 		 221 aa  71.6  0.000000000008  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011145  AnaeK_3020  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  25.35 
 
 		 221 aa  71.6  0.000000000008  Anaeromyxobacter sp. K  Bacteria  normal  0.197929  n/a   
 
 
-
 
NC_013595  Sros_8458  succinate dehydrogenase, cytochrome b subunit  28.7 
 
 		 253 aa  71.6  0.000000000008  Streptosporangium roseum DSM 43021  Bacteria  normal  0.70376  normal  1 
 
 
-
 
NC_007516  Syncc9605_2086  succinate dehydrogenase subunit C  27.01 
 
 		 208 aa  70.9  0.00000000001  Synechococcus sp. CC9605  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014148  Plim_2451  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  30.33 
 
 		 263 aa  70.5  0.00000000002  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.260267  n/a   
 
 
-
 
NC_007333  Tfu_2453  succinate dehydrogenase subunit C  29.56 
 
 		 238 aa  70.1  0.00000000002  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_009380  Strop_1710  succinate dehydrogenase/fumarate reductase cytochrome b subunit  25 
 
 		 227 aa  70.9  0.00000000002  Salinispora tropica CNB-440  Bacteria  normal  0.0407721  normal  0.47892 
 
 
-
 
NC_009943  Dole_1555  succinate dehydrogenase/fumarate reductase cytochrome b subunit  29.27 
 
 		 212 aa  69.3  0.00000000004  Desulfococcus oleovorans Hxd3  Bacteria  normal  1  n/a   
 
 
-
 
NC_009767  Rcas_3079  succinate dehydrogenase/fumarate reductase cytochrome b subunit  28.5 
 
 		 226 aa  69.3  0.00000000004  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007498  Pcar_0446  succinate dehydrogenase/fumarate reductase, cytochrome b subunit  25.44 
 
 		 223 aa  69.3  0.00000000004  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.0000000043641  n/a   
 
 
-
 
NC_010571  Oter_0671  succinate dehydrogenase/fumarate reductase cytochrome b subunit  28.9 
 
 		 253 aa  69.3  0.00000000004  Opitutus terrae PB90-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013739  Cwoe_5262  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  25.86 
 
 		 256 aa  69.3  0.00000000005  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  0.277764 
 
 
-
 
NC_007604  Synpcc7942_0314  succinate dehydrogenase subunit C  26.14 
 
 		 209 aa  63.5  0.000000002  Synechococcus elongatus PCC 7942  Bacteria  normal  0.884437  normal  1 
 
 
-
 
NC_009921  Franean1_1278  succinate dehydrogenase/fumarate reductase cytochrome b subunit  23.61 
 
 		 234 aa  63.2  0.000000003  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.563199 
 
 
-
 
NC_009523  RoseRS_2400  succinate dehydrogenase/fumarate reductase cytochrome b subunit  27.59 
 
 		 226 aa  62.4  0.000000005  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009953  Sare_1707  succinate dehydrogenase/fumarate reductase cytochrome b subunit  25 
 
 		 230 aa  62.4  0.000000006  Salinispora arenicola CNS-205  Bacteria  normal  1  hitchhiker  0.00155149 
 
 
-
 
NC_008820  P9303_01681  succinate dehydrogenase  23.92 
 
 		 210 aa  57.8  0.0000001  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal  1 
 
 
-
 
NC_013947  Snas_5226  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  26.64 
 
 		 232 aa  56.2  0.0000003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.659041  normal  1 
 
 
-
 
NC_014210  Ndas_3923  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  25.68 
 
 		 235 aa  53.1  0.000003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014151  Cfla_1918  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  25.82 
 
 		 248 aa  51.2  0.00001  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.48387  normal  1 
 
 
-
 
NC_012793  GWCH70_2607  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  23.5 
 
 		 202 aa  46.2  0.0004  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.00195238  n/a   
 
 
-
 
NC_009674  Bcer98_3217  succinate dehydrogenase/fumarate reductase cytochrome b subunit  24.57 
 
 		 208 aa  46.2  0.0004  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_013411  GYMC61_0843  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  22.95 
 
 		 202 aa  44.7  0.001  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007519  Dde_1258  fumarate reductase, cytochrome b subunit  28.83 
 
 		 218 aa  43.1  0.004  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  1  n/a   
 
 
-
 
NC_011773  BCAH820_4630  succinate dehydrogenase, cytochrome b558 subunit  22.86 
 
 		 208 aa  42.4  0.005  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_005945  BAS4414  succinate dehydrogenase, cytochrome b558 subunit  22.86 
 
 		 208 aa  42.4  0.005  Bacillus anthracis str. Sterne  Bacteria  normal  1  n/a   
 
 
-
 
NC_007530  GBAA_4755  succinate dehydrogenase, cytochrome b558 subunit  22.86 
 
 		 208 aa  42.4  0.005  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_005957  BT9727_4253  succinate dehydrogenase cytochrome B-558 subunit  22.86 
 
 		 208 aa  42.4  0.005  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  1  n/a   
 
 
-
 
NC_011772  BCG9842_B0609  succinate dehydrogenase, cytochrome b558 subunit  22.86 
 
 		 208 aa  42.4  0.006  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011725  BCB4264_A4626  succinate dehydrogenase, cytochrome b558 subunit  22.86 
 
 		 208 aa  42.4  0.006  Bacillus cereus B4264  Bacteria  normal  0.181495  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4346  succinate dehydrogenase/fumarate reductase cytochrome b subunit  22.86 
 
 		 208 aa  42.4  0.006  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  n/a   
 
 
-
 
NC_006274  BCZK4265  succinate dehydrogenase cytochrome B-558 subunit  22.86 
 
 		 208 aa  42.4  0.006  Bacillus cereus E33L  Bacteria  decreased coverage  0.0000000728248  n/a   
 
 
-
 
NC_009632  SaurJH1_1228  succinate dehydrogenase/fumarate reductase cytochrome b subunit  20.79 
 
 		 204 aa  41.6  0.009  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009487  SaurJH9_1206  succinate dehydrogenase/fumarate reductase cytochrome b subunit  20.79 
 
 		 204 aa  41.6  0.009  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  1  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>