| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BT9727_4253 |
|---|
| Symbol | sdhC |
|---|
| ID | 2856122 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_005957 |
|---|
| Strand | - |
|---|
| Start bp | 4315595 |
|---|
| End bp | 4316221 |
|---|
| Gene Length | 627 bp |
|---|
| Protein Length | 208 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637515669 |
|---|
| Product | succinate dehydrogenase cytochrome B-558 subunit |
|---|
| Protein accession | YP_038569 |
|---|
| Protein GI | 49480679 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2009] Succinate dehydrogenase/fumarate reductase, cytochrome b subunit |
|---|
| TIGRFAM ID | [TIGR02046] succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 80 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGGCC GCGAGTATAC GTTTCGTAAG TGGCACTCAT TAATGGGGGT CATCCCGGTT
GGTGTCTTTT TGACGCAACA TTTAATTGTA AACAACTTTG CAACACGAGG AGCAGAGGCT
TTTAACAAAG CTGCAGGCTT TATGGAGCTC CTTCCATTCC GGTATGCGCT AGAAATTTTC
ATTATCTTTT TACCAATACT GTACCATGCT ATATATGGCT TATATATTGC ATTTACAGCT
AAGAACAATG CGGTTTCTTA CGGTTATTTC CGTAACTGGA TGTTCGTCTT CCAAAGAATT
TCAGGTATCG TTACGCTGAT TTTCATTGCT TGGCACGTCT GGGAAACTCG TATTCAAGCA
ATGTTAGGTA AAGAGGTAAA CTATGATATG ATGGCTGATA TTTTAAACAA TCCAGCTATG
TTCGCATTCT ACTTAGTTGG TGTTGTTTCA ACAATTTTCC ACTTTGCAAA TGGACTATGG
ACATTCTGCA TTAGCTGGGG AATTACAGTA TCACCACGTT CACAAAGAAT CTCTACTTAT
GTAACATTAG CTATTTTCTT AGGTCTATCT TATGTAGGTG TGAGTGCATT ATTAGCGTTC
ATCGATCCAC AGCTAGCAAA CCAGTAA
|
|---|
| Protein sequence | MKGREYTFRK WHSLMGVIPV GVFLTQHLIV NNFATRGAEA FNKAAGFMEL LPFRYALEIF
IIFLPILYHA IYGLYIAFTA KNNAVSYGYF RNWMFVFQRI SGIVTLIFIA WHVWETRIQA
MLGKEVNYDM MADILNNPAM FAFYLVGVVS TIFHFANGLW TFCISWGITV SPRSQRISTY
VTLAIFLGLS YVGVSALLAF IDPQLANQ
|
|---|
| |