17 homologs were found in PanDaTox collection
for query gene CPS_1048 on replicon NC_003910
Organism: Colwellia psychrerythraea 34H



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_003910  CPS_1048  oxaloacetate decarboxylase, gamma subunit  100 
 
 		 92 aa  188  2e-47  Colwellia psychrerythraea 34H  Bacteria  normal  0.299241  n/a   
 
 
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NC_013456  VEA_002524  oxaloacetate decarboxylase gamma chain  34.44 
 
 		 85 aa  58.2  0.00000004  Vibrio sp. Ex25  Bacteria  normal  0.0628389  n/a   
 
 
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NC_009783  VIBHAR_03492  oxaloacetate decarboxylase subunit gamma  34.48 
 
 		 92 aa  55.1  0.0000003  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009831  Ssed_1320  sodium pump decarboxylase, gamma subunit  40.23 
 
 		 98 aa  54.3  0.0000005  Shewanella sediminis HAW-EB3  Bacteria  normal  0.219843  hitchhiker  0.0088654 
 
 
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NC_008321  Shewmr4_2987  sodium pump decarboxylases, gamma subunit  38.37 
 
 		 95 aa  49.7  0.00001  Shewanella sp. MR-4  Bacteria  normal  1  normal  0.809625 
 
 
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NC_009092  Shew_1219  sodium pump decarboxylases, gamma subunit  36.36 
 
 		 82 aa  48.9  0.00002  Shewanella loihica PV-4  Bacteria  hitchhiker  0.0000225864  normal  1 
 
 
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NC_009438  Sputcn32_1029  sodium pump decarboxylase, gamma subunit  35.96 
 
 		 88 aa  48.9  0.00003  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_009665  Shew185_1091  sodium pump decarboxylase, gamma subunit  36.78 
 
 		 88 aa  48.1  0.00004  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_008577  Shewana3_3166  sodium pump decarboxylases, gamma subunit  37.5 
 
 		 85 aa  48.1  0.00004  Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011663  Sbal223_3267  sodium pump decarboxylase, gamma subunit  37.08 
 
 		 88 aa  48.1  0.00004  Shewanella baltica OS223  Bacteria  normal  1  normal  0.0150987 
 
 
-
 
NC_008322  Shewmr7_3069  sodium pump decarboxylases, gamma subunit  36.78 
 
 		 85 aa  48.1  0.00004  Shewanella sp. MR-7  Bacteria  normal  1  normal  0.692299 
 
 
-
 
NC_010506  Swoo_3337  sodium pump decarboxylase, gamma subunit  34.09 
 
 		 81 aa  47.4  0.00007  Shewanella woodyi ATCC 51908  Bacteria  normal  1  hitchhiker  0.0000602904 
 
 
-
 
NC_009997  Sbal195_1125  sodium pump decarboxylase, gamma subunit  35.96 
 
 		 88 aa  46.6  0.0001  Shewanella baltica OS195  Bacteria  normal  0.65585  normal  1 
 
 
-
 
NC_011312  VSAL_I0638  oxaloacetate decarboxylase subunit gamma  34.09 
 
 		 83 aa  46.6  0.0001  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.471241  n/a   
 
 
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NC_009052  Sbal_1024  sodium pump decarboxylase, gamma subunit  35.63 
 
 		 100 aa  45.8  0.0002  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
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NC_008740  Maqu_0970  sodium pump decarboxylases, gamma subunit  29.55 
 
 		 83 aa  45.8  0.0002  Marinobacter aquaeolei VT8  Bacteria  normal  0.134882  n/a   
 
 
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NC_011138  MADE_02842  putative oxaloacetate decarboxylase subunit gamma  41.18 
 
 		 68 aa  41.2  0.005  Alteromonas macleodii 'Deep ecotype'  Bacteria  hitchhiker  0.00149059  n/a   
 
 
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