34 homologs were found in PanDaTox collection
for query gene Bamb_0125 on replicon NC_008390
Organism: Burkholderia ambifaria AMMD



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008390  Bamb_0125  hypothetical protein  100 
 
 		 181 aa  365  1e-100  Burkholderia ambifaria AMMD  Bacteria  normal  0.152305  n/a   
 
 
-
 
NC_010551  BamMC406_0135  hypothetical protein  96.69 
 
 		 180 aa  347  5e-95  Burkholderia ambifaria MC40-6  Bacteria  normal  0.938795  normal  1 
 
 
-
 
NC_007510  Bcep18194_A3315  hypothetical protein  81.11 
 
 		 184 aa  291  4e-78  Burkholderia sp. 383  Bacteria  normal  0.949846  normal  1 
 
 
-
 
NC_010508  Bcenmc03_0149  hypothetical protein  80 
 
 		 182 aa  288  4e-77  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.769439  normal  1 
 
 
-
 
NC_008060  Bcen_2920  hypothetical protein  79.89 
 
 		 190 aa  286  8e-77  Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
-
 
NC_008542  Bcen2424_0135  hypothetical protein  79.89 
 
 		 190 aa  286  8e-77  Burkholderia cenocepacia HI2424  Bacteria  normal  1  n/a   
 
 
-
 
NC_010084  Bmul_0133  hypothetical protein  79.33 
 
 		 200 aa  278  4e-74  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.179807  normal  0.680888 
 
 
-
 
NC_008825  Mpe_A3061  hypothetical protein  31.06 
 
 		 218 aa  54.7  0.0000007  Methylibium petroleiphilum PM1  Bacteria  normal  0.0293748  normal  0.740909 
 
 
-
 
NC_011662  Tmz1t_1942  pyridoxamine 5'-phosphate oxidase-related FMN-binding  31.82 
 
 		 172 aa  52.4  0.000004  Thauera sp. MZ1T  Bacteria  normal  0.844448  n/a   
 
 
-
 
NC_011206  Lferr_0214  pyridoxamine 5'-phosphate oxidase-related FMN-binding  27.87 
 
 		 161 aa  49.7  0.00002  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.610618  normal  1 
 
 
-
 
NC_011894  Mnod_0672  pyridoxamine 5'-phosphate oxidase-related FMN-binding  33.33 
 
 		 349 aa  48.1  0.00007  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0955731  n/a   
 
 
-
 
NC_011884  Cyan7425_1905  pyridoxamine 5'-phosphate oxidase-related FMN-binding  27.87 
 
 		 321 aa  47.8  0.0001  Cyanothece sp. PCC 7425  Bacteria  normal  0.203473  normal  1 
 
 
-
 
NC_010338  Caul_3686  pyridoxamine 5'-phosphate oxidase-related FMN-binding  32.17 
 
 		 203 aa  45.8  0.0003  Caulobacter sp. K31  Bacteria  normal  0.294993  normal  1 
 
 
-
 
NC_007348  Reut_B4730  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  29.52 
 
 		 311 aa  45.8  0.0004  Ralstonia eutropha JMP134  Bacteria  normal  0.115122  n/a   
 
 
-
 
NC_009953  Sare_4365  pyridoxamine 5'-phosphate oxidase-related FMN-binding  31.33 
 
 		 205 aa  44.7  0.0008  Salinispora arenicola CNS-205  Bacteria  normal  0.390379  hitchhiker  0.00304411 
 
 
-
 
NC_014211  Ndas_4917  pyridoxamine 5'-phosphate oxidase-related FMN-binding protein  29.35 
 
 		 216 aa  44.3  0.0009  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.277899  normal  0.439212 
 
 
-
 
NC_007406  Nwi_3034  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  32.64 
 
 		 204 aa  43.9  0.001  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.869856  normal  1 
 
 
-
 
NC_010505  Mrad2831_5328  pyridoxamine 5'-phosphate oxidase-related FMN-binding  37.65 
 
 		 217 aa  43.9  0.001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.327086  normal  1 
 
 
-
 
NC_011894  Mnod_2856  pyridoxamine 5'-phosphate oxidase-related FMN-binding  31.37 
 
 		 217 aa  43.5  0.001  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.307359  n/a   
 
 
-
 
NC_012791  Vapar_0662  oxidoreductase FAD/NAD(P)-binding domain protein  31.43 
 
 		 668 aa  43.1  0.002  Variovorax paradoxus S110  Bacteria  normal  0.935867  n/a   
 
 
-
 
NC_011989  Avi_1087  hypothetical protein  30.83 
 
 		 202 aa  43.1  0.002  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_007802  Jann_3734  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  35.06 
 
 		 230 aa  43.1  0.002  Jannaschia sp. CCS1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007912  Sde_1841  hypothetical protein  28.15 
 
 		 204 aa  43.1  0.002  Saccharophagus degradans 2-40  Bacteria  normal  0.41778  normal  1 
 
 
-
 
NC_010002  Daci_3322  oxidoreductase FAD/NAD(P)-binding subunit  29.07 
 
 		 691 aa  42.7  0.002  Delftia acidovorans SPH-1  Bacteria  normal  0.102774  normal  0.138588 
 
 
-
 
NC_007948  Bpro_0276  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  29.61 
 
 		 207 aa  42.4  0.003  Polaromonas sp. JS666  Bacteria  normal  0.435277  normal  1 
 
 
-
 
NC_012856  Rpic12D_3337  pyridoxamine 5'-phosphate oxidase-related FMN-binding  30.5 
 
 		 204 aa  42.4  0.003  Ralstonia pickettii 12D  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009636  Smed_1577  pyridoxamine 5'-phosphate oxidase-related FMN-binding  30.34 
 
 		 202 aa  42.7  0.003  Sinorhizobium medicae WSM419  Bacteria  normal  0.258426  normal  0.941692 
 
 
-
 
NC_011369  Rleg2_2020  pyridoxamine 5'-phosphate oxidase-related FMN-binding  29.93 
 
 		 203 aa  42  0.005  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.458077  normal  1 
 
 
-
 
NC_010682  Rpic_3660  pyridoxamine 5'-phosphate oxidase-related FMN-binding  30.5 
 
 		 204 aa  41.6  0.005  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010725  Mpop_4188  pyridoxamine 5'-phosphate oxidase-related FMN-binding  28.21 
 
 		 206 aa  41.6  0.006  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009380  Strop_3980  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  30.88 
 
 		 205 aa  41.6  0.007  Salinispora tropica CNB-440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008061  Bcen_4692  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  29.31 
 
 		 692 aa  41.2  0.008  Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
-
 
NC_008543  Bcen2424_3671  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  29.31 
 
 		 692 aa  41.2  0.008  Burkholderia cenocepacia HI2424  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014158  Tpau_0792  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  31.79 
 
 		 211 aa  40.8  0.01  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.770498  n/a   
 
 
-
 
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