Gene Avi_1087 details

Gene Information

• Locus tag: Avi_1087
• ID: 7386168
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 917495
• End bp: 918103
• Gene Length: 609 bp
• Protein Length: 202 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 643650572
• Product: hypothetical protein
• Protein accession: YP_002548780
• Protein GI: 222147823
• COG category: [R] General function prediction only
• COG ID: [COG3576] Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGACCA TTACCACGCT GCAACAGCTG GAAGCCCTCT ATGGCACAGT GAAGGAGACG 
TCACTTGCCA AGGAAATCGA TTATCTGAAC GATGATTACG CCGCCTTCGT TAGCGCTTCG 
CCTTTCATCC TGCTCGCTAC AGTCGGCGCT GATGGCACCG ATTGCTCGCC CAAGGGCGAT 
GCGCCTGGCT TCGTGGCAAT TCTTGACCGC AAGACACTGG CCATCCCCGA CCGCCCTGGC 
AACAATCGCA TCGATAACCT GAAGAACATC ATCGAAGACG GTCGGACATC TGTGCTGTTT 
CTCATCCCCG GCGTCGGCGA AACGCTGAGG GTCAATGGCC GGGCTACGAT CAGCGCCGAC 
CCGGACCTGC TGGCCCGCTT TGCCGTCGAT GGAAAGCTGC CGAAAAGCGT GATTTTGCTT 
GCCATCGACA GCGTCTATTT CCACTGCGCC AAGGCCATTC TCCGCTCAAA TCTCTGGGAC 
ACCTCCCGCT ATGTCGAGCG GTCCACCCTG CCATCACCCG GCCAGATCCT GAAAAACATC 
GTCAACGGCT TCGATGGCGA AGCCTATGAC CAGGAATTGC CCGAGCGGTC GAGGAAGAGC 
CTGTATTGA 

 

Protein sequence

MMTITTLQQL EALYGTVKET SLAKEIDYLN DDYAAFVSAS PFILLATVGA DGTDCSPKGD 
APGFVAILDR KTLAIPDRPG NNRIDNLKNI IEDGRTSVLF LIPGVGETLR VNGRATISAD 
PDLLARFAVD GKLPKSVILL AIDSVYFHCA KAILRSNLWD TSRYVERSTL PSPGQILKNI 
VNGFDGEAYD QELPERSRKS LY