| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0135 |
|---|
| Symbol | |
|---|
| ID | 6178147 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | + |
|---|
| Start bp | 158424 |
|---|
| End bp | 158966 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641679870 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001806853 |
|---|
| Protein GI | 172059201 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.938795 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGAAC CATCCCGATC CTATCCGCGC CACCCGGTGT TCCACGCGGG CGAGCTCGAC
GCGCATCACC GGTTCGGCGT CGCCGACGAA GCCGAGCGGA TGAGCGACGT CGTGACGACA
CGGCTGAGCA TCGGCGTGCG CCAGTTCGTC GAGTCGCAGC CGTTCATGTT CGTCGGCACG
ACGCGCGGCG GACCGGCGCG CGTGACCTGC GACATCGTGC AGGGCGTTCG CGACGCGAAC
GGCGATCTGT GGCCGGTCGT GCGCGTGATC GACACGAAGA CGCTGCGTTT CGCGCTGCCG
ACGCCCGGCG ACGGCGACCG GATCGATGCG CGCGAATGCG ACGGCCGCGG CGTCGGGCTG
CTGTTCATCG ATTTCGTGCG CGGCATTCGC TACCGGATCA ACGGCCGCGC GACGCTGCGG
GCCGATCTGC CGGAAGCGGA CGCGGCGCCC TGGCCGGCCG GCAGCCCGAT CGTCGAGGTG
GCGGTCGCGC AGGCGTATGG CAACTGCGGC ACGCGGGTCG TGCGGTTGCA GCCGCGCACC
TAG
|
|---|
| Protein sequence | MAEPSRSYPR HPVFHAGELD AHHRFGVADE AERMSDVVTT RLSIGVRQFV ESQPFMFVGT
TRGGPARVTC DIVQGVRDAN GDLWPVVRVI DTKTLRFALP TPGDGDRIDA RECDGRGVGL
LFIDFVRGIR YRINGRATLR ADLPEADAAP WPAGSPIVEV AVAQAYGNCG TRVVRLQPRT
|
|---|
| |