24 homologs were found in PanDaTox collection
for query gene BamMC406_0373 on replicon NC_010551
Organism: Burkholderia ambifaria MC40-6



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010551  BamMC406_0373  Phage-related protein endonuclease-like protein  100 
 
 
136 aa  272  1.0000000000000001e-72  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.743719 
 
 
-
 
NC_007651  BTH_I2726  hypothetical protein  92.45 
 
 
331 aa  202  1e-51  Burkholderia thailandensis E264  Bacteria  normal  0.302744  n/a   
 
 
-
 
NC_007651  BTH_I0110  hypothetical protein  86.79 
 
 
358 aa  184  4e-46  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_0204  GP47  77.67 
 
 
331 aa  174  5e-43  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_1657  hypothetical protein  70 
 
 
342 aa  143  7.0000000000000006e-34  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_2448  hypothetical protein  67.65 
 
 
342 aa  143  8.000000000000001e-34  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_4743  phage-related protein endonuclease-like protein  63.11 
 
 
334 aa  142  1e-33  Pseudomonas putida GB-1  Bacteria  normal  0.231327  normal 
 
 
-
 
NC_002947  PP_2495  hypothetical protein  65 
 
 
334 aa  141  3e-33  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009076  BURPS1106A_3684  hypothetical protein  78.31 
 
 
300 aa  141  3e-33  Burkholderia pseudomallei 1106a  Bacteria  normal  0.429616  n/a   
 
 
-
 
NC_009439  Pmen_1183  Phage-related protein endonuclease-like protein  60.78 
 
 
334 aa  137  4.999999999999999e-32  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_007969  Pcryo_2356  hypothetical protein  56.38 
 
 
368 aa  111  3e-24  Psychrobacter cryohalolentis K5  Bacteria  normal  0.0622812  normal  0.0723481 
 
 
-
 
NC_007969  Pcryo_1620  hypothetical protein  54.08 
 
 
374 aa  109  1.0000000000000001e-23  Psychrobacter cryohalolentis K5  Bacteria  normal  0.56685  normal  0.026153 
 
 
-
 
NC_007204  Psyc_0866  hypothetical protein  54.08 
 
 
374 aa  108  2.0000000000000002e-23  Psychrobacter arcticus 273-4  Bacteria  normal  0.896574  normal  0.759302 
 
 
-
 
NC_013411  GYMC61_0602  phage-type endonuclease  46.24 
 
 
311 aa  90.9  6e-18  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009524  PsycPRwf_1345  Phage-related protein endonuclease-like protein  40.43 
 
 
338 aa  87.4  7e-17  Psychrobacter sp. PRwf-1  Bacteria  unclonable  0.000000000265319  decreased coverage  0.000101887 
 
 
-
 
NC_007204  Psyc_0982  hypothetical protein  41.24 
 
 
338 aa  84.7  4e-16  Psychrobacter arcticus 273-4  Bacteria  hitchhiker  0.0000285055  hitchhiker  0.0000282178 
 
 
-
 
NC_008687  Pden_3739  putative phage-related protein  45.65 
 
 
322 aa  82.8  0.000000000000002  Paracoccus denitrificans PD1222  Bacteria  hitchhiker  0.00326083  normal  0.30406 
 
 
-
 
NC_008346  Swol_2263  hypothetical protein  40.66 
 
 
310 aa  80.9  0.000000000000006  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  hitchhiker  0.00963472  n/a   
 
 
-
 
NC_009616  Tmel_1473  Phage-related protein endonuclease-like protein  43.62 
 
 
306 aa  79  0.00000000000002  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_2619  YqaJ  36.84 
 
 
311 aa  72  0.000000000003  Bacillus cytotoxicus NVH 391-98  Bacteria  decreased coverage  0.000010002  n/a   
 
 
-
 
NC_012791  Vapar_0602  phage-type endonuclease  46.67 
 
 
247 aa  70.5  0.000000000007  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_0938  hypothetical protein  41.25 
 
 
303 aa  67.8  0.00000000005  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_3414  Phage-related protein endonuclease-like protein  32.95 
 
 
303 aa  53.5  0.0000009  Burkholderia phymatum STM815  Bacteria  normal  normal  0.0329559 
 
 
-
 
NC_011761  AFE_1286  hypothetical protein  45.95 
 
 
304 aa  40.8  0.006  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
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