7 homologs were found in PanDaTox collection
for query gene BBta_4976 on replicon NC_009485
Organism: Bradyrhizobium sp. BTAi1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009485  BBta_4976    100 
 
 
348 bp  690    Bradyrhizobium sp. BTAi1  Bacteria  normal  0.592347  normal 
 
 
-
 
NC_009485  BBta_4977  hypothetical protein  100 
 
 
210 bp  353  2e-95  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.464055  normal 
 
 
-
 
NC_011892  Mnod_8375  IS66 Orf2 family protein  90.2 
 
 
282 bp  61.9  0.0000001  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009508  Swit_5079  IS66 Orf2 family protein  90.91 
 
 
342 bp  56  0.000007  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A0258  hypothetical protein  94.12 
 
 
345 bp  52  0.0001  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.0620314 
 
 
-
 
NC_009485  BBta_6727  hypothetical protein  96.43 
 
 
351 bp  48.1  0.002  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.523617  normal 
 
 
-
 
NC_011894  Mnod_6336    100 
 
 
261 bp  46.1  0.006  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0667339  n/a   
 
 
-
 
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