Gene Swit_5079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5079 
Symbol 
ID5196068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009508 
Strand
Start bp195282 
End bp195623 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content65% 
IMG OID640579510 
ProductIS66 Orf2 family protein 
Protein accessionYP_001260458 
Protein GI148551028 
COG category[L] Replication, recombination and repair 
COG ID[COG3436] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones68 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCCTT CCGGCGCGCG GGTGTGGATC GCGATGGGCC ACACCGATAT GCGTCGTGGG 
ATGCAGGGTC TGGCGGCGAT GGTCCAGCAG CATTTCACGA AGGACCCATT CGCCGGCGAC
CTCTGGGTCT TCCGGGGGCG CAGCGGCACG CTGGTGAAGA TCATATGGCA CGACGGGGTC
GGCATGTCGC TCTACGCCAA GCGGCTCGAG AAGGGACGTT TCATCTGGCC TTCCGCCAGG
GACGGTGTGG TGTCGCTGAC GAGCTCCCAG CTTGCCTGCC TGCTCGACGG GATCGACTGG
CGCAACCCGC AATATTCCTG GCGGCCACAG AGTGCCGGAT AG
 
Protein sequence
MIPSGARVWI AMGHTDMRRG MQGLAAMVQQ HFTKDPFAGD LWVFRGRSGT LVKIIWHDGV 
GMSLYAKRLE KGRFIWPSAR DGVVSLTSSQ LACLLDGIDW RNPQYSWRPQ SAG