7 homologs were found in PanDaTox collection
for query gene Avi_7067 on replicon NC_011981
Organism: Agrobacterium vitis S4



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011981  Avi_7067  conjugal transfer protein TraH  100 
 
 
216 aa  439  9.999999999999999e-123  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011982  Avi_8135  conjugal transfer protein TraH  74.29 
 
 
209 aa  311  3.9999999999999997e-84  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011984  Avi_9193  conjugal transfer protein TraH  70.67 
 
 
208 aa  270  9e-72  Agrobacterium vitis S4  Bacteria  normal  0.19539  n/a   
 
 
-
 
NC_012853  Rleg_5511  conjugal transfer protein TraH  53.33 
 
 
203 aa  224  6e-58  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0167812 
 
 
-
 
NC_007959  Nham_4305  conjugal transfer protein TraH  52.88 
 
 
207 aa  214  8e-55  Nitrobacter hamburgensis X14  Bacteria  normal  0.670535  n/a   
 
 
-
 
NC_007961  Nham_4543  conjugal transfer protein TraH  53.85 
 
 
207 aa  213  1.9999999999999998e-54  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_011991  Avi_9599  conjugal transfer protein TraH  48.08 
 
 
211 aa  193  2e-48  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>