4 homologs were found in PanDaTox collection
for query gene Avi_1459 on replicon NC_011989
Organism: Agrobacterium vitis S4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011989  Avi_1459  hypothetical protein  100 
 
 
206 aa  395  1e-109  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_5252  putative signal transduction protein with EFhand domain  30.77 
 
 
292 aa  49.3  0.00004  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.849425 
 
 
-
 
NC_011368  Rleg2_5532  putative signal transduction protein with EFhand domain  31.91 
 
 
291 aa  47.8  0.0001  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.351777  normal  0.0443001 
 
 
-
 
NC_003295  RSc3104  putative calcium binding signal peptide protein  29.27 
 
 
194 aa  42.7  0.004  Ralstonia solanacearum GMI1000  Bacteria  normal  0.801881  normal 
 
 
-
 
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