Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_5532 |
Symbol | |
ID | 6978626 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011368 |
Strand | - |
Start bp | 1181770 |
End bp | 1182645 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643394631 |
Product | putative signal transduction protein with EFhand domain |
Protein accession | YP_002279449 |
Protein GI | 209547531 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.351777 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0443001 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGACCA TTTCCGCCGC AACATCGGTT TCTTCCTATT CCTATAGCAA GAACTCGACA TCCGCATCCC AGGACATCCT ATCCTGTAAT ACGGTTTCGG CAAAAAAATC AACCACAAGC CAGCAGACCA ACGAAGACTC GACCAACAGC GCCGAGAAAC TCATGTCCCA GCTGATGTCG CTGACGATGA ACGGCCTTAG CGGACAGTCC GGCTCCAGCG GGGAGCAGGA CGGCGAGGAA GGTATGGATG TTGCGCAGCT CGACACCGAT GGCGACGGCT ATGTGAGCAA GGCCGAGTTC GTCGCGGCCA GGCCATCCGA CGTGACCGAG GATCAGGCGG GCACGCTGTT CGACAGCTTC GACAGCGAAG ATTCCGGCTC GCTGTCGGTC GATGCGCTCA CCGAGGCCAT GTCCGCCCAG AGATCGCAGC GTACGGGCGG GCCACCGCCG CCGCCCGAAG GCGATGACGA GCTTTCGTCG CTGCTCTCCG ATCTCGATAC CGATGGAGAC GGGCTGGTGA GCAAGGCCGA ATTCGTCGCA GGCCGGCCGT CCGATGTGAG CGAGGATCAG GCAGGCACGC TGTTCGACAG CTTCGACAGC GAGAGCGCCG GCTCGCTGTC GGTCGACGCA TTGACCGAGG CGATGTCCGC TCAGTCGTCG CAACGCCCCG ACGGACCGCC GCCACCGCCG CCCGCCGAGG ATGAGCAGAC CGCATCCCTG CTCTCCGATC TCGATACCGA TGGAGACGGG CTCGTATCAT TGGACGAATT CATGGCCGGC AGGCCGGACG ACGTCACCGA AAGCCAGGCA AGCCAGCTTT TCGATATGCT CGACACATCG GGCACCGGTT CATTGTCCAC AAGCGCCACG AGCTGA
|
Protein sequence | MTTISAATSV SSYSYSKNST SASQDILSCN TVSAKKSTTS QQTNEDSTNS AEKLMSQLMS LTMNGLSGQS GSSGEQDGEE GMDVAQLDTD GDGYVSKAEF VAARPSDVTE DQAGTLFDSF DSEDSGSLSV DALTEAMSAQ RSQRTGGPPP PPEGDDELSS LLSDLDTDGD GLVSKAEFVA GRPSDVSEDQ AGTLFDSFDS ESAGSLSVDA LTEAMSAQSS QRPDGPPPPP PAEDEQTASL LSDLDTDGDG LVSLDEFMAG RPDDVTESQA SQLFDMLDTS GTGSLSTSAT S
|
| |