10 homologs were found in PanDaTox collection
for query gene Amir_5461 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013093  Amir_5461  hypothetical protein  100 
 
 
147 aa  282  1.0000000000000001e-75  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0209909  n/a   
 
 
-
 
NC_013235  Namu_2821  hypothetical protein  50.34 
 
 
145 aa  139  9.999999999999999e-33  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00110373  hitchhiker  0.00708379 
 
 
-
 
NC_013595  Sros_3965  hypothetical protein  44.93 
 
 
143 aa  119  1.9999999999999998e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  0.886576  normal  0.39659 
 
 
-
 
NC_014151  Cfla_1408  hypothetical protein  49.28 
 
 
139 aa  91.7  3e-18  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.29798  normal 
 
 
-
 
NC_013595  Sros_4196  hypothetical protein  34.53 
 
 
103 aa  63.5  0.0000000008  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.0089414  normal  0.251637 
 
 
-
 
NC_010338  Caul_3518  hypothetical protein  34.51 
 
 
136 aa  47  0.00009  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_008347  Mmar10_0511  hypothetical protein  25.53 
 
 
144 aa  44.3  0.0005  Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_3818  hypothetical protein  27.4 
 
 
142 aa  43.5  0.001  Saccharophagus degradans 2-40  Bacteria  hitchhiker  0.00333781  normal 
 
 
-
 
NC_008044  TM1040_2731  hypothetical protein  35.24 
 
 
161 aa  42  0.003  Ruegeria sp. TM1040  Bacteria  normal  0.340219  normal 
 
 
-
 
NC_008228  Patl_3870  hypothetical protein  27.27 
 
 
154 aa  42  0.003  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.0385155  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>