Gene Patl_3870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3870 
Symbol 
ID4175650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp4663917 
End bp4664381 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content38% 
IMG OID638056898 
Producthypothetical protein 
Protein accessionYP_663424 
Protein GI109900169 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0385155 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCATATA CAGAGAAAAG CATTTGGGTA TCGCTGATAT CTACAGTATG TATTTTTGGT 
TATTATTTTA TCAGTGTTTT GAGCCTAGGC TCGATGCCCT CAGAGCAGGC AAACAGTGCC
GCGGTTCAGC TATTATTTCA AGCGGTTGTC ACCACAGTAG TAGTAGAAAT TATTCTGCAT
AGTGTCATTG CGATATGTAA CCCAAGCGAT GCGCAACAGC CTGCTGATGA ACGAGATAAA
TTGTACAAAA TGAGAGCGAA CAGCGTTGGA TATCGCATAC TTATTTTGGG TGTTATGTTG
ACCTTAGGTC ATATATTATT AGGCTCGTTT ATTCCTGAAT TTAAAAGCCA AAATGCAGTC
GCTACTTTTC CGCTTTTAAG CGCATATATT TTATTTTTCA GTTTTATTAT TTCCGAAGTG
GCACGCTATT CGAGCCAAGT ATTTTTCTAT AGAAAAGGTG CCTAA
 
Protein sequence
MSYTEKSIWV SLISTVCIFG YYFISVLSLG SMPSEQANSA AVQLLFQAVV TTVVVEIILH 
SVIAICNPSD AQQPADERDK LYKMRANSVG YRILILGVML TLGHILLGSF IPEFKSQNAV
ATFPLLSAYI LFFSFIISEV ARYSSQVFFY RKGA