6 homologs were found in PanDaTox collection
for query gene Patl_3870 on replicon NC_008228
Organism: Pseudoalteromonas atlantica T6c



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008228  Patl_3870  hypothetical protein  100 
 
 
154 aa  312  9.999999999999999e-85  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.0385155  n/a   
 
 
-
 
NC_008048  Sala_2207  hypothetical protein  25.97 
 
 
140 aa  63.9  0.0000000008  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal  0.0907276 
 
 
-
 
NC_009972  Haur_1933  hypothetical protein  27.63 
 
 
139 aa  61.2  0.000000005  Herpetosiphon aurantiacus ATCC 23779  Bacteria  unclonable  0.000000161349  n/a   
 
 
-
 
NC_007912  Sde_3818  hypothetical protein  26.14 
 
 
142 aa  57.8  0.00000006  Saccharophagus degradans 2-40  Bacteria  hitchhiker  0.00333781  normal 
 
 
-
 
NC_013595  Sros_3965  hypothetical protein  25.16 
 
 
143 aa  49.7  0.00001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.886576  normal  0.39659 
 
 
-
 
NC_009972  Haur_2053  hypothetical protein  29.94 
 
 
264 aa  48.9  0.00003  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0309455  n/a   
 
 
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