11 homologs were found in PanDaTox collection
for query gene Amir_1874 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013093  Amir_1874  hypothetical protein  100 
 
 		 374 aa  709    Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_011729  PCC7424_0863  Tetratricopeptide TPR_2 repeat protein  26.39 
 
 		 991 aa  53.5  0.000006  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_008312  Tery_0607  tetratricopeptide TPR_2  25.93 
 
 		 957 aa  52.8  0.00001  Trichodesmium erythraeum IMS101  Bacteria  normal  1  normal  0.21285 
 
 
-
 
NC_009953  Sare_3671  SARP family transcriptional regulator  32.34 
 
 		 1048 aa  48.1  0.0002  Salinispora arenicola CNS-205  Bacteria  normal  1  hitchhiker  0.0046189 
 
 
-
 
NC_013946  Mrub_1066  diguanylate cyclase and serine/threonine protein kinase with TPR repeats  32.5 
 
 		 609 aa  48.5  0.0002  Meiothermus ruber DSM 1279  Bacteria  normal  0.94417  normal  1 
 
 
-
 
NC_008312  Tery_2811  tetratricopeptide TPR_2  25.83 
 
 		 782 aa  47.8  0.0003  Trichodesmium erythraeum IMS101  Bacteria  normal  0.0319314  normal  1 
 
 
-
 
NC_009921  Franean1_5729  TPR repeat-containing protein  32.16 
 
 		 712 aa  47.4  0.0004  Frankia sp. EAN1pec  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007355  Mbar_A2597  hypothetical protein  23.45 
 
 		 1238 aa  47  0.0005  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.0183256  normal  0.576788 
 
 
-
 
NC_008312  Tery_2809  tetratricopeptide TPR_2  23.45 
 
 		 985 aa  45.4  0.002  Trichodesmium erythraeum IMS101  Bacteria  unclonable  0.00683217  normal  1 
 
 
-
 
NC_011729  PCC7424_0864  TPR repeat-containing protein  26.16 
 
 		 1060 aa  43.9  0.005  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_008553  Mthe_0939  TPR repeat-containing protein  25.88 
 
 		 714 aa  43.1  0.008  Methanosaeta thermophila PT  Archaea  normal  1  n/a   
 
 
-
 
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