Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mthe_0939 |
Symbol | |
ID | 4463332 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosaeta thermophila PT |
Kingdom | Archaea |
Replicon accession | NC_008553 |
Strand | - |
Start bp | 1024616 |
End bp | 1026760 |
Gene Length | 2145 bp |
Protein Length | 714 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639699959 |
Product | TPR repeat-containing protein |
Protein accession | YP_843367 |
Protein GI | 116754249 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACCAAT TAGTAGTGCT TCATGAGATA TTCGAGTCGT TCTCCAGGGG CACCGGCGCC CTCCGCGATA TCGAGCCCAG GGCGGTTGAG GGCAGGTGTG CCAGTCTTGT GGTCAAGCTC CTGCAGAGCT GTCTCGATGG TGATATCGAT GAGGAGGTGT GTCGCGAGCT CTCCGAGTGC CTGAGCAATA TCTATGAGCT CAAGAGGCTG GGCGACATAT GCCGGAGGGC AGGCATGCCC GAGATCGCGA TGAAATGCTA CTCGAAGGCG CTCTCCCAGG CACAGGAGCC GCATGTCCGC TCTGTGCTGC TGAACAACCT CGGCCAGGTC CATGCGCAGA AGGGCGACCT GAGCAAGGCG ATTGTATACT ATAAAAAAGC CCTGGAGGGA TTCGAGTATG CAGGAGATCC GAGCAGCGCT GCCCATGTCA TGGGGAACCT AGCATCTGCG TACAGGCGCG CGTACCAGTG GGATCGAGCC GTGGAGTGCT ACTTCAAGGG TCTGAAGGGA TTTGAGAAGC TCAACGACAG CTTCGGCGTC GCCCAGATGA CCGGATCCCT GGGAAGGGTG TACGCAGAGA TGGGCGAGAG GGAGCTTGCT GTCTTGTATT ATGAGAAGAG CCTGAGGATG TTCGAGCAGC TCGGGGATCG CAGGAGCGCG GCCTGGCTTC TGAGCCGCCT TGGAAGGGTG TACGCAGAGA TGGGAAGGTG GGACGACTCG AAGAGATGTT TTGATAGAAG TTTGTCCATC TTCGAGGATC TCGGTCAGAG CCAGAACGCG GGCATAGTCC TCTCAAACCT CGGCCGCTTC TACCTGGAGA AGGGGGATCC TGATTCAGCC AGGGTTTCCC TGGAGCGCGC GCTGAAGCTG TTGAGAAAGG AGATGCTGCC TGTTTACCCG AACACGGTTG CGGCGCTCGC GGCCGCTTAC AGCCTGCTCG CGAGCAGGTA CGCTGCTGAG AGAAATGCGA AACAGTCGTC TCAGCTTTAC TCGAATGCAT CTGACTGCTT CAGCGAGCTT GCGCTCCATC CCAGGATTCT CATATCGGAG CTGAAGGCGG CTGCTGGACA GGCGAGATCG CTTTCCTATC TTGTGAAGCT CCGCGCAGAA CCCCGCGGGG ATGAGGCCGT CGCCTTGTGC GAGAGAGCGA TATCTGCGCT CGAGAGCACG ATCGCCAGCA CCACATCGAA GGACAGGGAG AAGGTCGCAT CACTCGTCCG GTGTCTGGAG GGGATAAAGG AGCTCTGGAG CATAGATCTC TACGCAGCGG AGCCGTGGCG GATACTCAGC ATGGTCTCCG TGGCCTGTGA GTACCTGATG GGTGGCATTC GGGAGCTTGC TAAGACCCTG GGACCGTACA AGGAGATGTA TGAAGCTCTT GGTGCCATCA ACGGGGCGCT AGATGACGAG AGGCAGCGCA GAGACTCTTC GGCGAACCTG AAGAGAGCTG CTGAGCATCT TCGGGCATCA CAGACTGAAA GCTTCGAGAA GATCGCCGAA ACGCTCGAGA TGGCTGGAAG ATCCGAGCTT GTTCAGGGAA TGAGTCCGTC TGACATACTG AACTATGGAG CTCACAGAAA GGCTCTCATG AGCATCGGCT GGGCTGCAGC GCAGAGCCTG CTATCGGAGA TCGACAGGAC TGGATGGATC TACGCATGGG ACGAGTCGAT GAATCTCTCA GAGATGGGGC CGGTTGGAAG GACCGAGCGG ATAAGGAGAA AGGCGGAGAG CATCGCGGAG ATGAAAGAGG TGCCTGTGGT AGAGGTGGGT TCTGTGAACA TCAGGGGCTC TGCAGTTGAT GTGCCGGTGG AGAGCGCTCT CGGGAACACA TCCATTGTGC CCACACAGAC CGTGCTTGTG TCTGCTGCAA CATCGCTGCC TGCTCGTCCT GAGACCGTGC GCCCTGAGAT TACGCTTGAG GGGCCATACG TCATCGAGAG CTTCGAGGAT TATGAGCAGG AGGGTGCATT TTACGATGAG CCTCACAGAG ACAATCCCAC TGCTGGTACC GGTTGCGCAG AGTCTGCCTA TGTGGCTCAA AGAGGCCATC TGCGGGACTC GATCGCCGCG AGGATCATCG TGGGGCTGAT AGCGCTGGCA GGGACGGCAT ACGCGATAAT GCATGTGATT CTGGGGGTTC TGTGA
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Protein sequence | MDQLVVLHEI FESFSRGTGA LRDIEPRAVE GRCASLVVKL LQSCLDGDID EEVCRELSEC LSNIYELKRL GDICRRAGMP EIAMKCYSKA LSQAQEPHVR SVLLNNLGQV HAQKGDLSKA IVYYKKALEG FEYAGDPSSA AHVMGNLASA YRRAYQWDRA VECYFKGLKG FEKLNDSFGV AQMTGSLGRV YAEMGERELA VLYYEKSLRM FEQLGDRRSA AWLLSRLGRV YAEMGRWDDS KRCFDRSLSI FEDLGQSQNA GIVLSNLGRF YLEKGDPDSA RVSLERALKL LRKEMLPVYP NTVAALAAAY SLLASRYAAE RNAKQSSQLY SNASDCFSEL ALHPRILISE LKAAAGQARS LSYLVKLRAE PRGDEAVALC ERAISALEST IASTTSKDRE KVASLVRCLE GIKELWSIDL YAAEPWRILS MVSVACEYLM GGIRELAKTL GPYKEMYEAL GAINGALDDE RQRRDSSANL KRAAEHLRAS QTESFEKIAE TLEMAGRSEL VQGMSPSDIL NYGAHRKALM SIGWAAAQSL LSEIDRTGWI YAWDESMNLS EMGPVGRTER IRRKAESIAE MKEVPVVEVG SVNIRGSAVD VPVESALGNT SIVPTQTVLV SAATSLPARP ETVRPEITLE GPYVIESFED YEQEGAFYDE PHRDNPTAGT GCAESAYVAQ RGHLRDSIAA RIIVGLIALA GTAYAIMHVI LGVL
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