Gene Tery_0607 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_0607 
Symbol 
ID4242764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp981336 
End bp984209 
Gene Length2874 bp 
Protein Length957 aa 
Translation table11 
GC content34% 
IMG OID638105911 
Producttetratricopeptide TPR_2 
Protein accessionYP_720524 
Protein GI113474463 
COG category[S] Function unknown 
COG ID[COG4995] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.21285 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGATGA CAATTTCGGC CATACCTAGC ATTGTAATTA TTCCCCATGT CTTGGCCCAA 
ACTCCTGCCC TAGAGACGGA AAATTCCCAG GAATCATCTG CCTCTAAGGC CAAGGGAGAT
AAGTTGTTCA AAACAGGTGT AGAACAATTT CGGAAAGGAA TATTTGATGA AGCTCTGGAA
AACTACGAAC AAGTTTTAAA TATTCGTAAA GAATTAGGAG ACCTTGGGGG AATAGGCCAA
GTTCTTAACA ATATTGGGGA TGTATATATT AACCAAAGAA AATATTCAGA AGCAATGGGT
GTTTTGCAAG AAGCTTTAGC TATTCACCGA AAGATAAATG ATCGTCCTAG TGTGGCAGAA
AGTCTAAACC TTATTGGTTT TGTTTATCAG AAACAAGGTG AGCTTTCTCA AGCAATAAGT
TTACATCAAG AAGCTTTGGA GATTTCTCAA GGGGCTAGCG ATCGCTCTAT GGAAGGAGAG
TCATTACATA ATATTGCTGT AGTTAAAGCA AGTCAGAGAC AGTTTGACCA AGCACTGCAA
TTTTACTTAG AAGCACTTGC TATCCGAGAA GAAGTGGGCG ATCCTCGAAA TCTTGGCCGA
ACCCTTAATA ATATAGGAGT AGTTTACTTC AACCAAGGTA ATTATGACAA AGCTTTGGAA
AAATATCAAA AAGCTTTAAG TGCACGGCGA GAAATTAATG ATAGTGCTGG AATTGGCAGG
TTATTAAATA ATATCGGTTT TGTCTATAGG GAAAAGGGTG AAAATTCTGA AGCTCTCAAA
TATTTCCGGC AAGCAGTTGC TATGTTAAAA ACTGTTGGTG ACCAAATAAG TGTAGGACGA
ATTTATGGTT TCATGGGCAT GCTTTATCAA AAAGAAGGAG AGGAAACTAA GGCTTTAGAA
GCTTATGAAA AAAGTTTAGA AGCTACTAAA ATTGCTGGGG ATGGTGTTGG ACAATTAAAA
GCTTTAAATT ATTTGGGTGA TACTTATTAT GAAATGGGAG AAAATACTAA AGCAAAGTCA
ACTTATGAAG CGGCTTTAGT ACTTTACCAA GAAGCAGAAG ACTCCCCTGG TCAAGGTAAA
AGTATGATTG GTTTGGGAAA GGTTTATAAC CGTTTAGGAG AAAATCAGAA AGCCAAAGAA
ATTTTACTAA AATCTTTATC TATTAATCAG ACAGCAGGAG AAAAGTCGGT TGTTGCTGAT
AATATGAATG GTTTGGGAGA GGTTTATTAT AGTTCTGGGG ATTATTCTAT TTCTCTAAAT
TATTATATGC TTGCTTTAAA GAATTTACCT GATAAAAATG ATAAAAATGC TGTTTCTATA
GCTTATCACG GAATAGGAGA TTCTTTCTTG AAGCTTAAAC AATATCCTCA AGCTTTAGAA
AATTTAGAGA AAGCATTAGC TAGATATCAA GAAGTTGGAA ATACTGCTAA AGTTGGTCGC
ATTTATGAAC ATTTAGGTAC AATATTAGTG GCTCAAGAAA AACCTGAATT GGCAGTAGTT
TTCTATAAAC AAGCTATTAA TATTTATCGG ACTATAGGGA GTCAGGAATA TCAGAAAGGT
TTCTGGGAAA ATTCAAAAGA AATTTACAGT AATTTAGTAG GTTTACTATT ACAACAAGAA
CGTATTTTTG AAGCTCAACA AGTTTTAGAT TTGCTGAGGC TGCAAGAATT AGATAATTAT
TTCGGAAATG TGAAGGGTAA TGAAGTAAGG GCGAAAAAAA TAAAGTTGCT AAGTGTAGAA
GAAAAAATTC TGGCTCAGAA AAGCAAAAGT GTTTTAGAAC TGGAAATTGA TCAAAATGAT
CTTAAGGCAA ATTTTTCACA GTTTCAAAGT CTGCAGTTTA AATTGGAAAA GTTACCTGGA
GCAGCATTAT TTTATCCTTT GATTTTGCCA GATAAGTTAG AATTGGTATT AATTACGGCA
GATGGAAAAA CGGTACATGA AACTGTAGAG GTAAAAGGGA AAGAAGTTGA ACGAGCGATC
GCTGATTTTC GCCGCACAAT TTCTAATCCT ATTGTCAATG TTAAAAAATC TTCTGAAAAA
CTCTATAATT GGTTGATAAA ACCAATAGAA AATGAGTTGA CTAAAGCTAA AATTAATACA
ATTATTTATG TGCCGGATAA GCAACTACGT TATCTACCTT TAGCTGCACT TTATGATGGA
GAACAATGGT TAGTAGAAAG ATTTATTATT AATAATATTA TTGCAGCTAG TCTGACAAGT
TTTGAGACTC AACCTCAAAA TCAACTTCGT GTATTAGCAG CTGCTTTAAC AGAAGGTGAA
TATAAGGTTC GGCTCGGATC TCGCGAAGTT TCTTTGAGAC CAACAACAGG AAAATTAGTC
GAAAATTTAG TTGAAATAAT TCCTGGTAGT CGTCAGTTTA TTAATAGTGA GTTTAGTTCA
CAAGCAATAG TTAATAATAT TAAAGATTAC AATGTTTTGC ATTTAGATAC TCCTGTGGCA
TTGTTAACAA AAAAAGAAGG AAGTGGCAAA CCGGAAGACT CTTTTATCTT GTTTGGAGAT
GGTGATCGTA TTACTCTATC AAATATGGAA AATTGGTCAT TACCAAATGT GGATTTAGTA
GTATTAAGTG CTGCTGAAAC TAATATTAGT GGGCGTATGG GTAATGGGGA AGAAATAATT
GGTTTTGGTT ATCAAATGCA AAATGCAGGA GTAGAAACAA TAATAGCTTC TTTGTGGCGA
GTTAACGATG ATTCGGATAA TTTAATGAAT ACTTTTTACA CAGTTTTACA AGAAGGAAAA
AGCAAAGCAG AAGCATTACG CAAAGCTCAA ATAAGTATGA TTACTGGAAA TGATCAAGAA
GATAGTAATC CTTACTACTG GGCCTCATTT ATTTTGATAG GAAATGGACT TTAA
 
Protein sequence
MVMTISAIPS IVIIPHVLAQ TPALETENSQ ESSASKAKGD KLFKTGVEQF RKGIFDEALE 
NYEQVLNIRK ELGDLGGIGQ VLNNIGDVYI NQRKYSEAMG VLQEALAIHR KINDRPSVAE
SLNLIGFVYQ KQGELSQAIS LHQEALEISQ GASDRSMEGE SLHNIAVVKA SQRQFDQALQ
FYLEALAIRE EVGDPRNLGR TLNNIGVVYF NQGNYDKALE KYQKALSARR EINDSAGIGR
LLNNIGFVYR EKGENSEALK YFRQAVAMLK TVGDQISVGR IYGFMGMLYQ KEGEETKALE
AYEKSLEATK IAGDGVGQLK ALNYLGDTYY EMGENTKAKS TYEAALVLYQ EAEDSPGQGK
SMIGLGKVYN RLGENQKAKE ILLKSLSINQ TAGEKSVVAD NMNGLGEVYY SSGDYSISLN
YYMLALKNLP DKNDKNAVSI AYHGIGDSFL KLKQYPQALE NLEKALARYQ EVGNTAKVGR
IYEHLGTILV AQEKPELAVV FYKQAINIYR TIGSQEYQKG FWENSKEIYS NLVGLLLQQE
RIFEAQQVLD LLRLQELDNY FGNVKGNEVR AKKIKLLSVE EKILAQKSKS VLELEIDQND
LKANFSQFQS LQFKLEKLPG AALFYPLILP DKLELVLITA DGKTVHETVE VKGKEVERAI
ADFRRTISNP IVNVKKSSEK LYNWLIKPIE NELTKAKINT IIYVPDKQLR YLPLAALYDG
EQWLVERFII NNIIAASLTS FETQPQNQLR VLAAALTEGE YKVRLGSREV SLRPTTGKLV
ENLVEIIPGS RQFINSEFSS QAIVNNIKDY NVLHLDTPVA LLTKKEGSGK PEDSFILFGD
GDRITLSNME NWSLPNVDLV VLSAAETNIS GRMGNGEEII GFGYQMQNAG VETIIASLWR
VNDDSDNLMN TFYTVLQEGK SKAEALRKAQ ISMITGNDQE DSNPYYWASF ILIGNGL