9 homologs were found in PanDaTox collection
for query gene AFE_3002 on replicon NC_011761
Organism: Acidithiobacillus ferrooxidans ATCC 23270



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011206  Lferr_2612  hypothetical protein  100 
 
 
231 aa  434  1e-121  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_011761  AFE_3002  TonB family protein  100 
 
 
231 aa  434  1e-121  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_1915  TonB family protein  31.05 
 
 
237 aa  57.8  0.0000001  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_011761  AFE_2268  TonB family protein  31.05 
 
 
237 aa  57.8  0.0000001  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.461611  n/a   
 
 
-
 
NC_011206  Lferr_1944  TonB family protein  28.57 
 
 
242 aa  53.9  0.000002  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_011761  AFE_2301  TonB family protein  28.57 
 
 
242 aa  53.9  0.000002  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4210  collagen adhesion protein  34.94 
 
 
2179 aa  45.1  0.001  Bacillus cereus G9842  Bacteria  normal  0.950826  normal 
 
 
-
 
NC_009783  VIBHAR_03102  hypothetical protein  45.16 
 
 
1482 aa  42.7  0.004  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011725  BCB4264_A1095  collagen adhesion protein  33.77 
 
 
2272 aa  43.1  0.004  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
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