| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_03102 |
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| Symbol | |
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| ID | 5553714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | - |
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| Start bp | 3123926 |
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| End bp | 3128374 |
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| Gene Length | 4449 bp |
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| Protein Length | 1482 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640908583 |
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| Product | hypothetical protein |
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| Protein accession | YP_001446278 |
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| Protein GI | 156975371 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3170] Tfp pilus assembly protein FimV |
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| TIGRFAM ID | [TIGR03504] FimV C-terminal domain
[TIGR03505] FimV N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTCAAA ATTATAAGCG TTTGTTAGCA GCCCTTGTGC TGATGAGCGC GACTCAGACA
TCGTCAGCGG TTCAAGCCGA AGGTATTCGT CTTGTAGGAC CCTCTGGTGA AGTGCAAGCG
TCTCCAAGCT ATGCTGAGGA GATTGAACGA GCGTTACCCG CTCCACCTAA AAATGACCAA
CCGTCGCGTT TCTTCGGTCC GACTGGTCAA AACGAGACTC TCTGGTCGAT TGCTTCTGAA
TTGCGACCAT CTCGAAATGT TTCTGTACAA CAAACGCTAC TCGCCATTTA CCGTATCAAC
CCTCAAGCGT TTGATAACCA AAATATCCAT GAATTGATCC CTGGTAGTCG TCTTCGCGTG
CCTTCTCTTG ACCAGGTTCA AAGTGCGACG ACAGAGCAAG CCGTCGCGAT CATGAAAGCG
CACGAAGCTC GCTTAACTCA ACCGAAGCCA AAACCAGCGC AACCAGTAAA ACCAAAAGTT
GAGCAACCAA AGCCTGTTAC TGAAGTTGCA AAACCTGAAC CAAAACCAGA AACGGTTAAG
CCGGAATTAC CAAAACCGCA ACCGATTAAA GTGGTTGAGC CAACAACACC GGTTCCAGCG
GTGACCACAT CACCTGAGGG TGAGCAGCAG ATCAGCGCGC TAAAAGACAA GCTGCAAGGT
TCGCACAGTG AGTTAGAGTC ACTGGAAGAG AAGAACCACC GCCTGCGTTT GATGCTTTCT
GAAGTACAAA GCGAGGTTGA AACGCTAAAA ACGTCGTTGA ATGACGAAGA ACGCATTCGC
TCAGAAGTAG AAAAACTGCT GGCTGAGGAG CGTCAGCGTG TTGCTGAGCA ACAACGTATG
CAGCCAAGTA CGATGGATAA AATCCTATCG AATGGCTGGC TTGTCGGTCT TGCTGCATTA
ATCCCAGGTG CGCTAATCGC TTTACTCGTT GTCATGCTAC TTGGTCGTCG TTCTAAGGCA
AAAGAGGAAG AAGCGGCTAC GCAAGAACAG CAAAACGTTG ACCCTCTTGC AGCTCCCATT
GGTCTAGCCG CTGCGGATGA GCTAGATGAA GAGCTAAGCC TTGATGACGA TCTGTTTGGC
GATGACGACG AAACAGAAAA CCTATTTGGG CAAGAAGAAC AGCAACCTGA AGAAGAAGAC
GTTTTCGGTA ACCTAGATGA CGATGACCTC GACTTCAACC TAGAGGGTGA TGATGGCGAA
GATCCATTTG CTGGTATCGG CGATGATGGT GAACTAGACG TTGGTTTCGA TGAATTCGAT
TCTTCTAGCA ACGGCATCAA GGTCAACGGT GAAGAAAAAG CCCTTGGTCT TGAAGAGATG
GAACGTGCGC TTGATGAAGT CACGCCAGAG CTGGAAGTGT TGGATGACGA TGATGATGCA
GGCTTCGATC TTTCTGACGA AGACGGTTCG GATGCATTGT CTGATGATGC TTTCGCAGAA
TTGCTTGCCG CAGATGAGCC AGCAGAAGCG CTACAAAATG ATGCCGTCGA CCAAGCTATG
CTGGATGACC TATTCGCCGA TCTTGATGGT GATGATCTCA ACTTAGACGT TGAAGATGAC
AAGTCAGCGG TGTCTGAGAG TGCGTTCTCA GTAGGTGAAG CGACAGACGA TGACATCGAT
AAACTGCTAG CACAATACGA GCAGCCAACA ACAGGCGAAT CAGATGAGGA TGTGTTTGAT
GAACTTGAAG CACTTTCTGG ACTAACAGAA AACGACTCAA ATGAAGAGGA CGCATCGGCG
TTACTTGATG AATTGATCGG TGAAGACGAT GGCGAGTCAC TTAACGAACT CGATCCCCTT
CAAGAGCTGG AAGATATCGC GGATTTAAGT GAAGAACCAA CCATTGATGA AGACAGCACG
GACTTACTTG ATGAGTTAAT TGGCTTCGAA GATGAAGACT CCACCGATGA TGACTTTGGC
CCGCTTGATG AGCTAGAAAA GTTATCGGGC TTCGATGGTG ACGATACTCT AGAAGACATT
GATGAAAACA GTGTTGACCT GTTGGACGAG CTGCTCAGCG ACGAGAGCGT TGAAGAAGAG
CAGAACGAAA CAAGCAGTGA AATCGACCCA TTTGATGAAT TGATTTGTGA AGATGACGAG
ACAGAGCAAA CAGCGGCTAC ACAGAGCGAT GACGATCTTC TCGCTTCGCT AGGTTTTGAT
GATTTAGAGC CAGCAGTAGA GGAAGTACTG CCTCAATCTC AACCAGTGAT GGATGCTGAG
CCTGTTGTTG ATCTAGAAGA TGAAAAGGCT GCGCTGGGTT TAGACTCTGG TTTGGATATC
GATGCGTTAT TGAGTGAAAA TCAGCCAGAG GCTGAAACAC AATCGTTAGA ACAAGCATCA
AACGACGAAC TTGACTCAGA AGCAGCCGAA TCTATTGCCG ACTTTGATAG CAACGATTTC
CTTGGTGATC TAGAAGACGC ATCCCCTGAG CATGATCCGT TAATGACGGA ACTGGATGAG
CTATTCGAAA GTAACAATGA AGCTCTGTTA CCAAGTGAAC AAGAGCGTTC AGACTTCGCA
GCAGAACTGG ATGCTTTGAT CGGTGAAGAA GCATCAGAAA CGGACACTGA AGAGCATTTA
CCTGAGCTGC CTGAAGCATT AGCGCCACAA GAAGAAACGA TCGTAGAACC GGACGCAGAA
CCAGAACCAG CTCCAGCGTT CACGCCAACA CCAAATACGG TTGAAAACGA ATTTGGAATT
CCTCAAGAAG AGGATTGGCT GGTTGATGAG ATCGAATCTG AGAGCAAAGT TGAACAAGAG
CCGGTGGCGG CAAGCTCAAC TGATGCTGAT GTTGACGAAG AAGAGTTCAA CTTCGATGAG
TTGGAGCTTC CAGAGTTTAA CGAAGAAGAC GCATTAGCTT CGATGGCCGA TGAGCCTGCG
CTAGCTGAAT CTGAAACCGT TGAGCCTGAA GCATCAGTTG CGGAAGCAGA AGAAGAGTTC
AACTTCGATG AGTTAGAGCT ACCAGAGTTC AACGAAGAAG ATGCATTAGC TTCGATGGCT
GAAGAGCCTG CGCTAGCGGA ATCTGAAATC GCTGAACCTG AAGCGCCAGT CGCGGAAGCA
GAAGAAGAGT TCAACTTCGA TGAGTTGGAG CTTCCGGAGT TCAACGAAGA AGATGCATTA
GCTTCGATGG CCGATGAGCC TGCGCTAGTT GAATCTGAAA CCGCTGAGCC TGAAGCATCA
GTTGCGGAAG CAGAAGAAGA GTTCAACTTC GGTGAGTTAG AGCTGCCAGA GTTCAACGAA
GAAGACGCAC TGGCATCTAT GGCTGAAGAG CCTACGCTTG AGGAGTCTGA AACCGCTGAG
CCTGAAGCAT CAGTTGCGCA AGCAGAAGAA GAGTTCAACT TTGATGAGTT GGAGCTTCCA
GAGTTCAACG AAGAAGACGC ATTAGCTTCA ATGGCCGAAG AGCCTACGCT TGCGGAATCT
GAAACCGCTG GGCCTGCAGC GCCAGTTGTG GAAGCAGAAG AAGAGTTCAA CTTCGACGAG
TTAGAGCTGC CAGAATTCAA CGAAGAAGAC GCATTAGCTT CAATGGCCGA TGAGCCAGCG
CTTGCGGAAT CTGAAACCGT TGAGCCTCAA GCGCCAGTCG CGGAAGCAGA AGAAGAGTTC
AACTTCGATG ACTTTGAACT ACCAGAGTTC AATGAAGAAG ATGCTTTGGC ATCAGTGACA
GAAGAGGTAG CAAGTTCTGA CTCTGACACT GTTGAACCTG AGGTTGTTAA AGAGCACTCA
GAAGTCTCTC AAGCAGTACA ACAAGCAGAG AATGACCATG ACGCCCTGTT TGAAGTCTTC
GCGCAACCAG AAGCTTTCAG TGCTGATTTA GAGCCTGAGC CGAGCAATGA CCTGGAGTCG
GAATTAAATG ACTTTGAAGA GTCTGCGATG GCGAACTTGT TGTCTGAAAA CGCGGAATCG
GAAGTATTTG ATGGCAAGTT AGACAGTGAC ACCATTGCAA GTGCAGGTAT GGACTTTGAA
ACCATGCTGG ATGTTGGTGA CGATTGGGAT GGCTTTAAGC TGTCGCCAGA AAACACCTCG
TCAACGGCAG AGGTTCCAGA AGACCAGCGT GAAGTATGGA GTTCATCAGA AGCACTGGCA
CAGCCAGAGA TCGCGCAAGA AAACTGGGGT GAGCAAGACG ACCTAACCGA TTTTGATCCG
AAGAAAAATC AATTCATGAC CATTGATGAG TTGATGGCTC AGGTAGACAA AGACGGTGGT
GAGTTTGAAG AGCAAGAGCT CAAACTTGAC GTGGGTTTGA ATGAGTTCCC GGATGTGATT
GGCGATATTG GTGATGTCGA CGTAGATACC AATGCAGAAG CCGCAGGTAA GCTCGACCTA
GCAAAAATCT ACCTTGAAAT GAACGATCCT CAAGGTGCGA TTAAACTATT AGAGGAAGCT
ATCGTCTACG GGGAAGATGA TATTCGCCGA GAGGCTAAGA GTCTCATCGA TACGATTAAC
GGTCGATAA
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| Protein sequence | MRQNYKRLLA ALVLMSATQT SSAVQAEGIR LVGPSGEVQA SPSYAEEIER ALPAPPKNDQ
PSRFFGPTGQ NETLWSIASE LRPSRNVSVQ QTLLAIYRIN PQAFDNQNIH ELIPGSRLRV
PSLDQVQSAT TEQAVAIMKA HEARLTQPKP KPAQPVKPKV EQPKPVTEVA KPEPKPETVK
PELPKPQPIK VVEPTTPVPA VTTSPEGEQQ ISALKDKLQG SHSELESLEE KNHRLRLMLS
EVQSEVETLK TSLNDEERIR SEVEKLLAEE RQRVAEQQRM QPSTMDKILS NGWLVGLAAL
IPGALIALLV VMLLGRRSKA KEEEAATQEQ QNVDPLAAPI GLAAADELDE ELSLDDDLFG
DDDETENLFG QEEQQPEEED VFGNLDDDDL DFNLEGDDGE DPFAGIGDDG ELDVGFDEFD
SSSNGIKVNG EEKALGLEEM ERALDEVTPE LEVLDDDDDA GFDLSDEDGS DALSDDAFAE
LLAADEPAEA LQNDAVDQAM LDDLFADLDG DDLNLDVEDD KSAVSESAFS VGEATDDDID
KLLAQYEQPT TGESDEDVFD ELEALSGLTE NDSNEEDASA LLDELIGEDD GESLNELDPL
QELEDIADLS EEPTIDEDST DLLDELIGFE DEDSTDDDFG PLDELEKLSG FDGDDTLEDI
DENSVDLLDE LLSDESVEEE QNETSSEIDP FDELICEDDE TEQTAATQSD DDLLASLGFD
DLEPAVEEVL PQSQPVMDAE PVVDLEDEKA ALGLDSGLDI DALLSENQPE AETQSLEQAS
NDELDSEAAE SIADFDSNDF LGDLEDASPE HDPLMTELDE LFESNNEALL PSEQERSDFA
AELDALIGEE ASETDTEEHL PELPEALAPQ EETIVEPDAE PEPAPAFTPT PNTVENEFGI
PQEEDWLVDE IESESKVEQE PVAASSTDAD VDEEEFNFDE LELPEFNEED ALASMADEPA
LAESETVEPE ASVAEAEEEF NFDELELPEF NEEDALASMA EEPALAESEI AEPEAPVAEA
EEEFNFDELE LPEFNEEDAL ASMADEPALV ESETAEPEAS VAEAEEEFNF GELELPEFNE
EDALASMAEE PTLEESETAE PEASVAQAEE EFNFDELELP EFNEEDALAS MAEEPTLAES
ETAGPAAPVV EAEEEFNFDE LELPEFNEED ALASMADEPA LAESETVEPQ APVAEAEEEF
NFDDFELPEF NEEDALASVT EEVASSDSDT VEPEVVKEHS EVSQAVQQAE NDHDALFEVF
AQPEAFSADL EPEPSNDLES ELNDFEESAM ANLLSENAES EVFDGKLDSD TIASAGMDFE
TMLDVGDDWD GFKLSPENTS STAEVPEDQR EVWSSSEALA QPEIAQENWG EQDDLTDFDP
KKNQFMTIDE LMAQVDKDGG EFEEQELKLD VGLNEFPDVI GDIGDVDVDT NAEAAGKLDL
AKIYLEMNDP QGAIKLLEEA IVYGEDDIRR EAKSLIDTIN GR
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