12 homologs were found in PanDaTox collection
for query gene TM1040_3808 on replicon NC_008042
Organism: Ruegeria sp. TM1040



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008042  TM1040_3808  LuxR family transcriptional regulator  100 
 
 		 266 aa  552  1e-156  Ruegeria sp. TM1040  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008043  TM1040_3181  LuxR family transcriptional regulator  53.88 
 
 		 267 aa  294  1e-78  Ruegeria sp. TM1040  Bacteria  normal  1  normal  0.484185 
 
 
-
 
NC_007493  RSP_0122  LuxR family transcriptional regulator  24.6 
 
 		 233 aa  51.6  0.00001  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009049  Rsph17029_1758  autoinducer-binding domain-containing protein  24.6 
 
 		 233 aa  51.6  0.00001  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009667  Oant_0198  autoinducer-binding domain-containing protein  27.23 
 
 		 235 aa  47.4  0.0002  Ochrobactrum anthropi ATCC 49188  Bacteria  decreased coverage  0.00000129067  n/a   
 
 
-
 
NC_013757  Gobs_2485  transcriptional regulator, LuxR family  34.67 
 
 		 316 aa  47  0.0003  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_009428  Rsph17025_1709  autoinducer-binding domain-containing protein  22.98 
 
 		 233 aa  45.4  0.0009  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.781724  normal  1 
 
 
-
 
NC_007643  Rru_A2179  LuxR family transcriptional regulator  25.39 
 
 		 239 aa  45.1  0.001  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_004310  BR0190  LuxR family transcriptional regulator  25 
 
 		 235 aa  44.3  0.002  Brucella suis 1330  Bacteria  normal  0.195449  n/a   
 
 
-
 
NC_009505  BOV_0183  LuxR family transcriptional regulator  25 
 
 		 235 aa  43.9  0.003  Brucella ovis ATCC 25840  Bacteria  normal  0.0816251  n/a   
 
 
-
 
NC_007322  GBAA_pXO1_0029  hypothetical protein  19.78 
 
 		 498 aa  43.1  0.005  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.514953  n/a   
 
 
-
 
NC_007650  BTH_II1231  ATP-dependent transcription regulator LuxR  24.09 
 
 		 234 aa  42.4  0.009  Burkholderia thailandensis E264  Bacteria  normal  0.681253  n/a   
 
 
-
 
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