7 homologs were found in PanDaTox collection
for query gene Swoo_1248 on replicon NC_010506
Organism: Shewanella woodyi ATCC 51908



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010506  Swoo_1248  hypothetical protein  100 
 
 
610 aa  1260  Shewanella woodyi ATCC 51908  Bacteria  unclonable  3.68006e-06  unclonable  2.16996e-08 
 
 
-
 
NC_010506  Swoo_3656  hypothetical protein  31.11 
 
 
608 aa  277  4e-73  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0159137  normal  0.0559089 
 
 
-
 
NC_013037  Dfer_1842  hypothetical protein  28.25 
 
 
612 aa  232  2e-59  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_013162  Coch_0200  ATP/GTP-binding site  28.75 
 
 
564 aa  224  3e-57  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_010655  Amuc_0480  Glycosyl hydrolase family 98 putative carbohydrate binding module  26.95 
 
 
794 aa  213  8e-54  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal  0.133222 
 
 
-
 
NC_013132  Cpin_4392  Alpha-galactosidase  26.37 
 
 
589 aa  171  4e-41  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.941976  normal  0.0174119 
 
 
-
 
NC_010655  Amuc_1463  hypothetical protein  28.7 
 
 
596 aa  135  3e-30  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal 
 
 
-
 
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