16 homologs were found in PanDaTox collection
for query gene Pcar_0619 on replicon NC_007498
Organism: Pelobacter carbinolicus DSM 2380



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007498  Pcar_0619  hypothetical protein  100 
 
 
170 aa  338  2e-92  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00260364  n/a   
 
 
-
 
NC_011901  Tgr7_0609  hypothetical protein  28.99 
 
 
159 aa  56.6  0.0000001  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.647076  n/a   
 
 
-
 
NC_013132  Cpin_6225  hypothetical protein  26.19 
 
 
151 aa  53.5  0.000001  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_007484  Noc_1708  hypothetical protein  25.58 
 
 
193 aa  52  0.000004  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_4345  hypothetical protein  30 
 
 
151 aa  51.6  0.000005  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_50940  hypothetical protein  29.17 
 
 
164 aa  50.1  0.00001  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.30636  hitchhiker  0.0000172849 
 
 
-
 
NC_008709  Ping_2756  water stress/hypersensitive response protein  26.62 
 
 
264 aa  48.9  0.00003  Psychromonas ingrahamii 37  Bacteria  normal  0.718779  normal 
 
 
-
 
NC_011901  Tgr7_1587  Water Stress and Hypersensitive response domain protein  28.26 
 
 
158 aa  49.3  0.00003  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.205042  n/a   
 
 
-
 
NC_009654  Mmwyl1_2935  late embryogenesis abundant protein 2  26.4 
 
 
280 aa  47  0.0001  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_0086  Late embryogenesis abundant protein 2  26.03 
 
 
277 aa  45.4  0.0004  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_0080  hypothetical protein  26.03 
 
 
295 aa  44.7  0.0005  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.669106  n/a   
 
 
-
 
NC_011891  A2cp1_0098  Late embryogenesis abundant protein 2  26.03 
 
 
277 aa  45.1  0.0005  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.817518  n/a   
 
 
-
 
NC_009483  Gura_3286  water stress/hypersensitive response protein  23.49 
 
 
165 aa  44.7  0.0007  Geobacter uraniireducens Rf4  Bacteria  unclonable  0.000000000209158  n/a   
 
 
-
 
NC_007404  Tbd_0149  putative lipoprotein  26 
 
 
160 aa  44.3  0.0008  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.400959  normal  0.856742 
 
 
-
 
NC_007517  Gmet_2480  putative lipoprotein  22.15 
 
 
167 aa  44.3  0.0008  Geobacter metallireducens GS-15  Bacteria  hitchhiker  2.30613e-17  normal 
 
 
-
 
NC_009675  Anae109_0079  water stress/hypersensitive response domain-containing protein  25.96 
 
 
276 aa  41.6  0.005  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.801419  normal  0.160349 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>