Gene Tgr7_1587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_1587 
Symbol 
ID7316213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand+ 
Start bp1705193 
End bp1705669 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content63% 
IMG OID643616480 
ProductWater Stress and Hypersensitive response domain protein 
Protein accessionYP_002513658 
Protein GI220934759 
COG category[S] Function unknown 
COG ID[COG5608] Conserved secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.205042 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAAGAT TGCTCCTCAC AACGGGTTTG CTGCTGGGTC TCGTGCTCCT GGGTCTGGGT 
GGCTGCGCCT ACATGGGTGT ACGCACCGAA CCACCGCGCG TTCACCTGGT CGGTATGCAA 
CTGCAGCAGG CGGAACTCTT TGAGCAGCGC TACCTGCTCA GGCTGCGGAT CCAGAACCCC 
AATGACTTCC CGCTGAACAT CCGCGGACTG GATTTCCAGG TGCAGGTGAA TGGCGAACGT 
TTCGCCGACG GCGTGTCCAG CCAGACCCTG CAGATCCCGG GCTTTGGGGA GGGCCTGGCG 
GAGGTGACGG TGTCCTCCAG CCTCTGGTCA CTGACGCGCC AGTTGCGTGA CATGGGGGAG 
GGCGGCCTTG AGCAGATGGA GTACCGGATC TTCGGGCGCA TTGCCCTGAC GGGGCATGCG 
CTACCGGTGT CCTTCGAGTC GACGGGGGAT CTGGGCCTGT TCAATCCTGC CCGCTGA
 
Protein sequence
MPRLLLTTGL LLGLVLLGLG GCAYMGVRTE PPRVHLVGMQ LQQAELFEQR YLLRLRIQNP 
NDFPLNIRGL DFQVQVNGER FADGVSSQTL QIPGFGEGLA EVTVSSSLWS LTRQLRDMGE 
GGLEQMEYRI FGRIALTGHA LPVSFESTGD LGLFNPAR