10 homologs were found in PanDaTox collection
for query gene Francci3_0087 on replicon NC_007777
Organism: Frankia sp. CcI3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007777  Francci3_0087  dehydrogenases and related proteins-like  100 
 
 
376 aa  733  Frankia sp. CcI3  Bacteria  normal  0.467087  normal 
 
 
-
 
NC_009921  Franean1_7221  oxidoreductase domain-containing protein  77.12 
 
 
359 aa  508  1e-143  Frankia sp. EAN1pec  Bacteria  normal  0.0813175  normal 
 
 
-
 
NC_013093  Amir_0477  oxidoreductase domain protein  27.78 
 
 
332 aa  48.9  0.0002  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4054  oxidoreductase domain protein  32.03 
 
 
382 aa  47  0.0006  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_007604  Synpcc7942_1665  oxidoreductase  37.36 
 
 
371 aa  45.4  0.002  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.351306 
 
 
-
 
NC_009049  Rsph17029_2906  oxidoreductase domain-containing protein  27.85 
 
 
381 aa  45.4  0.002  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.789976  normal 
 
 
-
 
NC_008687  Pden_4436  oxidoreductase domain-containing protein  32.38 
 
 
390 aa  44.3  0.003  Paracoccus denitrificans PD1222  Bacteria  normal  0.47548  normal 
 
 
-
 
NC_008528  OEOE_0048  dehydrogenase or related protein  28.33 
 
 
319 aa  43.9  0.004  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
NC_006685  CNC00020  conserved hypothetical protein  26.86 
 
 
383 aa  43.1  0.008  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  n/a   
 
 
-
 
NC_007493  RSP_1245  Gfo/Idh/MocA family oxidoreductase  27.85 
 
 
381 aa  42.7  0.009  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.775668  n/a   
 
 
-
 
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