| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0087 |
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| Symbol | |
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| ID | 3905131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 106217 |
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| End bp | 107347 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637877417 |
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| Product | dehydrogenases and related proteins-like |
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| Protein accession | YP_479210 |
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| Protein GI | 86738810 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.467087 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGGCACG GACCTGCTCC GGGCTCGGAT GGCGAGCGCT CGGCCTCCGA TCGGTTCTCG
GCGACAATCG GGTTGACCGG CGACCCTCGC CACCGGACGG GGAGCACTAT CAATGCTGTG
ACGACGCTCC CCGATCTGGT GCCGCCGCGC GATCCCGCCC TTTCTCAGGC CTGGCGGGAG
CTGCGGCGCG TCGTGCGTCG GCGGCAGCCG GACCTGCCCC TCGCGATGGC CCTGGTCACC
GACGGCTCGG ACAGCACTAC CGCCGAGGTG CTGCGCGATG CCGGGGTCGA CGTCGTCGGT
CTCCTCGCCC CGGAGCCGCT GGAGTCCCTG GCCTGGGCCG CCGAGGCGGG TGTCCGACGG
GCGTACGCCG ATCTGCTCAC CTTGCTCTCG GACGACATCG AGGCGGTCTG CGTGGAGATG
CCGCCGCCCG CCTCCGACAT CGTCGCCCGG CAAGCGGCCG AGATCGGCCT GCACGTGCTC
CTGGCCGGGC CGGCGACCGT CGAGGCCGAG GCCCTGCGCG CGGTCGCCGA CCTCGCCGAG
GAGGGTGATC TCGCCCACGT GGTCGCGCTC GACGGGCGGG CCTGGCCGGC TGCCACCCAC
GTCGCGGCGA CCGTTCCCTC CCTGGGCCGG CTCACCCAGA TGACCGTGGT GGGCGCGCCG
AACGGGCCCG CCGGGCGAGT CGAGATCATC GATCTGGCGA TGCGCTGGTG CGGCGAGATC
CTCGCGGTCT GCGCCGATCC GGCCGCGATG CCCGCCCCGG CGCTCACCCC GGACGCACCG
GTGACGCTGG CCCTGCTGGC GGCGAGCGGC GCGACGGTCC TGATCAACGA GCAGATGGGC
GGGAACCTCG GCACAGCCAC CCTCACGGTA TGCGGCGACT CCGGACGCAT CGTCGTCCGG
GGCCGTCTGG TCCGCCGCCA GGACGGCAGC GGCATCCGGG ATCTGATGAT GCCGACCGTA
CCGACCTCCC GGCCGGGGCT GATGGAGGCC ACCTACGACG TGGTGCGTGC CACCGAACTC
GACGACGCCC GGCTGGTCCG CGGCGCCACC TTCCACGACC TGCTCACCGC GAACCACCTG
ATGGCCGCCG CGCAGACCTC CCATCAGCAG GGCGGTTGGG TGGAGCTCTG A
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| Protein sequence | MRHGPAPGSD GERSASDRFS ATIGLTGDPR HRTGSTINAV TTLPDLVPPR DPALSQAWRE
LRRVVRRRQP DLPLAMALVT DGSDSTTAEV LRDAGVDVVG LLAPEPLESL AWAAEAGVRR
AYADLLTLLS DDIEAVCVEM PPPASDIVAR QAAEIGLHVL LAGPATVEAE ALRAVADLAE
EGDLAHVVAL DGRAWPAATH VAATVPSLGR LTQMTVVGAP NGPAGRVEII DLAMRWCGEI
LAVCADPAAM PAPALTPDAP VTLALLAASG ATVLINEQMG GNLGTATLTV CGDSGRIVVR
GRLVRRQDGS GIRDLMMPTV PTSRPGLMEA TYDVVRATEL DDARLVRGAT FHDLLTANHL
MAAAQTSHQQ GGWVEL
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